Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RIPK2O43353 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RIPK2O43353 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.69■□□□□ 0.26
RIPK2O43353 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RIPK2O43353 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RIPK2O43353 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.69■□□□□ 0.26
RIPK2O43353 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RIPK2O43353 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RIPK2O43353 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RIPK2O43353 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.68■□□□□ 0.26
RIPK2O43353 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RIPK2O43353 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.68■□□□□ 0.26
RIPK2O43353 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
RIPK2O43353 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RIPK2O43353 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RIPK2O43353 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.68■□□□□ 0.26
RIPK2O43353 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RIPK2O43353 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RIPK2O43353 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.68■□□□□ 0.26
RIPK2O43353 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.68■□□□□ 0.26
RIPK2O43353 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RIPK2O43353 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.68■□□□□ 0.26
RIPK2O43353 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.68■□□□□ 0.26
RIPK2O43353 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.68■□□□□ 0.26
RIPK2O43353 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RIPK2O43353 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RIPK2O43353 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RIPK2O43353 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RIPK2O43353 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RIPK2O43353 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RIPK2O43353 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RIPK2O43353 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RIPK2O43353 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.68■□□□□ 0.26
RIPK2O43353 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.68■□□□□ 0.26
RIPK2O43353 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.68■□□□□ 0.26
RIPK2O43353 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RIPK2O43353 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.68■□□□□ 0.26
RIPK2O43353 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RIPK2O43353 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.68■□□□□ 0.26
RIPK2O43353 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RIPK2O43353 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.68■□□□□ 0.26
RIPK2O43353 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RIPK2O43353 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RIPK2O43353 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RIPK2O43353 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RIPK2O43353 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIPK2O43353 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIPK2O43353 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RIPK2O43353 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIPK2O43353 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.67■□□□□ 0.26
RIPK2O43353 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.67■□□□□ 0.26
RIPK2O43353 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RIPK2O43353 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIPK2O43353 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.67■□□□□ 0.26
RIPK2O43353 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RIPK2O43353 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.67■□□□□ 0.26
RIPK2O43353 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.67■□□□□ 0.26
RIPK2O43353 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RIPK2O43353 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.67■□□□□ 0.26
RIPK2O43353 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RIPK2O43353 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIPK2O43353 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIPK2O43353 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.67■□□□□ 0.26
RIPK2O43353 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
RIPK2O43353 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIPK2O43353 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIPK2O43353 ARMC10P1-201ENST00000313754 855 ntBASIC16.67■□□□□ 0.26
RIPK2O43353 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIPK2O43353 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIPK2O43353 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RIPK2O43353 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.67■□□□□ 0.26
RIPK2O43353 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
RIPK2O43353 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.67■□□□□ 0.26
RIPK2O43353 AC139887.3-201ENST00000568585 713 ntBASIC16.67■□□□□ 0.26
RIPK2O43353 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.67■□□□□ 0.26
RIPK2O43353 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.67■□□□□ 0.26
RIPK2O43353 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RIPK2O43353 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.67■□□□□ 0.26
RIPK2O43353 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIPK2O43353 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
RIPK2O43353 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIPK2O43353 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIPK2O43353 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIPK2O43353 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RIPK2O43353 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RIPK2O43353 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIPK2O43353 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RIPK2O43353 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RIPK2O43353 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIPK2O43353 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIPK2O43353 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RIPK2O43353 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RIPK2O43353 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIPK2O43353 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.66■□□□□ 0.26
RIPK2O43353 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.66■□□□□ 0.26
RIPK2O43353 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms