Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 WASH6P-202ENST00000359512 1437 ntBASIC17.37■□□□□ 0.37
CAPN9O14815 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN9O14815 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN9O14815 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN9O14815 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.37■□□□□ 0.37
CAPN9O14815 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.37■□□□□ 0.37
CAPN9O14815 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN9O14815 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CAPN9O14815 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN9O14815 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.37■□□□□ 0.37
CAPN9O14815 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN9O14815 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CAPN9O14815 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN9O14815 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN9O14815 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN9O14815 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN9O14815 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN9O14815 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.36■□□□□ 0.37
CAPN9O14815 AC016027.1-202ENST00000607927 1699 ntBASIC17.36■□□□□ 0.37
CAPN9O14815 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.36■□□□□ 0.37
CAPN9O14815 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.36■□□□□ 0.37
CAPN9O14815 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CAPN9O14815 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN9O14815 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
CAPN9O14815 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
CAPN9O14815 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN9O14815 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN9O14815 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN9O14815 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.36■□□□□ 0.37
CAPN9O14815 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN9O14815 KRT18P34-201ENST00000488218 1270 ntBASIC17.36■□□□□ 0.37
CAPN9O14815 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.36■□□□□ 0.37
CAPN9O14815 FAM86C2P-203ENST00000528684 1004 ntBASIC17.36■□□□□ 0.37
CAPN9O14815 RARRES2P8-201ENST00000566335 367 ntBASIC17.36■□□□□ 0.37
CAPN9O14815 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
CAPN9O14815 AC027796.2-201ENST00000575326 344 ntBASIC17.36■□□□□ 0.37
CAPN9O14815 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.36■□□□□ 0.37
CAPN9O14815 MIR4469-201ENST00000583919 79 ntBASIC17.36■□□□□ 0.37
CAPN9O14815 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.36■□□□□ 0.37
CAPN9O14815 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.36■□□□□ 0.37
CAPN9O14815 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN9O14815 AC099522.2-201ENST00000607001 744 ntBASIC17.36■□□□□ 0.37
CAPN9O14815 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN9O14815 AC020765.3-201ENST00000613051 740 ntBASIC17.36■□□□□ 0.37
CAPN9O14815 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN9O14815 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.36■□□□□ 0.37
CAPN9O14815 ELL2P1-201ENST00000413990 1906 ntBASIC17.36■□□□□ 0.37
CAPN9O14815 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
CAPN9O14815 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN9O14815 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.36■□□□□ 0.37
CAPN9O14815 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.36■□□□□ 0.37
CAPN9O14815 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CAPN9O14815 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN9O14815 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN9O14815 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN9O14815 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN9O14815 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN9O14815 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN9O14815 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN9O14815 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN9O14815 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN9O14815 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN9O14815 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN9O14815 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CAPN9O14815 LINC00554-201ENST00000564841 3011 ntBASIC17.35■□□□□ 0.37
CAPN9O14815 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.35■□□□□ 0.37
CAPN9O14815 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CAPN9O14815 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.35■□□□□ 0.37
CAPN9O14815 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN9O14815 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN9O14815 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CAPN9O14815 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN9O14815 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN9O14815 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CAPN9O14815 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN9O14815 AL355306.1-201ENST00000415580 579 ntBASIC17.35■□□□□ 0.37
CAPN9O14815 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.35■□□□□ 0.37
CAPN9O14815 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN9O14815 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CAPN9O14815 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.35■□□□□ 0.37
CAPN9O14815 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.35■□□□□ 0.37
CAPN9O14815 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.35■□□□□ 0.37
CAPN9O14815 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CAPN9O14815 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CAPN9O14815 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN9O14815 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN9O14815 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN9O14815 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN9O14815 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CAPN9O14815 GGT4P-201ENST00000623672 1708 ntBASIC17.35■□□□□ 0.37
CAPN9O14815 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN9O14815 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.35■□□□□ 0.37
CAPN9O14815 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN9O14815 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN9O14815 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CAPN9O14815 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN9O14815 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CAPN9O14815 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CAPN9O14815 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.34■□□□□ 0.37
CAPN9O14815 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms