Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.06□□□□□ -0.48
SMKR1H3BMG3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.06□□□□□ -0.48
SMKR1H3BMG3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SMKR1H3BMG3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMKR1H3BMG3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMKR1H3BMG3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMKR1H3BMG3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
SMKR1H3BMG3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMKR1H3BMG3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SMKR1H3BMG3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
SMKR1H3BMG3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SMKR1H3BMG3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SMKR1H3BMG3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMKR1H3BMG3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.06□□□□□ -0.48
SMKR1H3BMG3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMKR1H3BMG3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 SNX33P1-201ENST00000592116 1762 ntBASIC12.05□□□□□ -0.48
SMKR1H3BMG3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 AC138035.3-201ENST00000622706 2791 ntBASIC12.05□□□□□ -0.48
SMKR1H3BMG3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 AP002414.1-201ENST00000391405 1147 ntBASIC12.05□□□□□ -0.48
SMKR1H3BMG3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 COX11P1-201ENST00000489116 835 ntBASIC12.05□□□□□ -0.48
SMKR1H3BMG3 GUSBP12-201ENST00000513727 720 ntBASIC12.05□□□□□ -0.48
SMKR1H3BMG3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 AC124864.1-201ENST00000623408 392 ntBASIC12.05□□□□□ -0.48
SMKR1H3BMG3 AC011558.1-201ENST00000623459 338 ntBASIC12.05□□□□□ -0.48
SMKR1H3BMG3 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.05□□□□□ -0.48
SMKR1H3BMG3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 AC069224.1-201ENST00000566372 1715 ntBASIC12.05□□□□□ -0.48
SMKR1H3BMG3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 CICP13-201ENST00000422015 2789 ntBASIC12.05□□□□□ -0.48
SMKR1H3BMG3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMKR1H3BMG3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 FAM45BP-202ENST00000592932 1624 ntBASIC12.04□□□□□ -0.48
SMKR1H3BMG3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 ST20-AS1-201ENST00000560255 4223 ntBASIC12.04□□□□□ -0.48
SMKR1H3BMG3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 HBZP1-201ENST00000354915 429 ntBASIC12.04□□□□□ -0.48
SMKR1H3BMG3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SMKR1H3BMG3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms