Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 AC073592.4-201ENST00000623827 446 ntBASIC17.86■□□□□ 0.45
CCDC66A2RUB6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.86■□□□□ 0.45
CCDC66A2RUB6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 AC097637.2-201ENST00000624096 1997 ntBASIC17.86■□□□□ 0.45
CCDC66A2RUB6 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC66A2RUB6 AC092364.2-201ENST00000596710 2692 ntBASIC17.85■□□□□ 0.45
CCDC66A2RUB6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 IER3-202ENST00000376377 1350 ntBASIC17.85■□□□□ 0.45
CCDC66A2RUB6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 AP002414.1-201ENST00000391405 1147 ntBASIC17.85■□□□□ 0.45
CCDC66A2RUB6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 AC074051.2-201ENST00000565115 352 ntBASIC17.85■□□□□ 0.45
CCDC66A2RUB6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 AC092329.2-201ENST00000598402 547 ntBASIC17.85■□□□□ 0.45
CCDC66A2RUB6 AC004817.3-201ENST00000602957 2129 ntBASIC17.85■□□□□ 0.45
CCDC66A2RUB6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 PPP1R26P4-201ENST00000619065 3527 ntBASIC17.85■□□□□ 0.45
CCDC66A2RUB6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC66A2RUB6 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 AC104819.1-201ENST00000504587 486 ntBASIC17.84■□□□□ 0.45
CCDC66A2RUB6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms