Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 MYO15B-237ENST00000642007 4893 ntBASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 FAM185BP-201ENST00000443595 716 ntBASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 AC009947.1-201ENST00000444350 727 ntBASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 OR7E47P-204ENST00000575924 449 ntBASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
TRGV1A0A0A0MS02 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TRGV1A0A0A0MS02 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
TRGV1A0A0A0MS02 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
TRGV1A0A0A0MS02 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
TRGV1A0A0A0MS02 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TRGV1A0A0A0MS02 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
TRGV1A0A0A0MS02 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.96□□□□□ -0.5
TRGV1A0A0A0MS02 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC11.96□□□□□ -0.5
TRGV1A0A0A0MS02 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
TRGV1A0A0A0MS02 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
TRGV1A0A0A0MS02 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
TRGV1A0A0A0MS02 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
TRGV1A0A0A0MS02 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
TRGV1A0A0A0MS02 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC11.96□□□□□ -0.5
TRGV1A0A0A0MS02 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC11.96□□□□□ -0.5
TRGV1A0A0A0MS02 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 AC018695.7-201ENST00000624587 2492 ntBASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 HLA-A-201ENST00000376802 1334 ntBASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 MMP17-203ENST00000535004 719 ntTSL 3 BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 MIR4515-201ENST00000584082 81 ntBASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 RPS15-207ENST00000591032 550 ntTSL 3 BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 RPS15-212ENST00000593052 629 ntTSL 2 BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 Z83851.2-201ENST00000609564 659 ntBASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 ACTL9-202ENST00000612068 1252 ntBASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 ME2P1-201ENST00000426028 1970 ntBASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms