Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 OR2I1P-209ENST00000641730 5365 ntBASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 AL596275.1-201ENST00000423464 877 ntBASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 MINOS1P3-201ENST00000457048 203 ntBASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 MIR4492-201ENST00000581627 80 ntBASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 MPDU1-223ENST00000582151 728 ntBASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 AC133561.5-201ENST00000635547 218 ntBASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV18A0A075B6X5 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 RCN1P2-201ENST00000398357 915 ntBASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 AC096582.2-201ENST00000510860 516 ntBASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 AC023157.3-201ENST00000619086 2088 ntBASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRAV18A0A075B6X5 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV18A0A075B6X5 SIGLEC16-201ENST00000599858 1437 ntBASIC14.15□□□□□ -0.14
TRAV18A0A075B6X5 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.15□□□□□ -0.14
TRAV18A0A075B6X5 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV18A0A075B6X5 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV18A0A075B6X5 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV18A0A075B6X5 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV18A0A075B6X5 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV18A0A075B6X5 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAV18A0A075B6X5 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms