Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CYP46A1Q9Y6A2 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.49■□□□□ 0.71
CYP46A1Q9Y6A2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CYP46A1Q9Y6A2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CYP46A1Q9Y6A2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CYP46A1Q9Y6A2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.49■□□□□ 0.71
CYP46A1Q9Y6A2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.49■□□□□ 0.71
CYP46A1Q9Y6A2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CYP46A1Q9Y6A2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CYP46A1Q9Y6A2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CYP46A1Q9Y6A2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 AC092919.2-201ENST00000623631 1645 ntBASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 AC132872.4-202ENST00000622924 2756 ntBASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 AC140658.5-201ENST00000438532 169 ntBASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 KRT18P2-201ENST00000447938 1258 ntBASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 PAUPAR-201ENST00000630360 2965 ntBASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CYP46A1Q9Y6A2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 AC007967.2-201ENST00000432613 625 ntBASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 KRT19P2-202ENST00000557173 1012 ntBASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 IL9RP2-201ENST00000423948 1312 ntBASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CYP46A1Q9Y6A2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CYP46A1Q9Y6A2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CYP46A1Q9Y6A2 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CYP46A1Q9Y6A2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CYP46A1Q9Y6A2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.46■□□□□ 0.71
CYP46A1Q9Y6A2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CYP46A1Q9Y6A2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CYP46A1Q9Y6A2 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.46■□□□□ 0.71
CYP46A1Q9Y6A2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.46■□□□□ 0.71
CYP46A1Q9Y6A2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CYP46A1Q9Y6A2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CYP46A1Q9Y6A2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.46■□□□□ 0.71
CYP46A1Q9Y6A2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CYP46A1Q9Y6A2 KRT18P34-201ENST00000488218 1270 ntBASIC19.46■□□□□ 0.71
CYP46A1Q9Y6A2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CYP46A1Q9Y6A2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.46■□□□□ 0.71
CYP46A1Q9Y6A2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms