Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 AC092364.2-201ENST00000596710 2692 ntBASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 HLA-V-201ENST00000429037 534 ntBASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 AC007274.1-201ENST00000439805 662 ntBASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 AP000344.2-201ENST00000512987 629 ntBASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 AC069262.1-201ENST00000539058 672 ntBASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 AC073389.1-201ENST00000595595 795 ntBASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
RAI2Q9Y5P3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.58■□□□□ 0.25
RAI2Q9Y5P3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
RAI2Q9Y5P3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAI2Q9Y5P3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAI2Q9Y5P3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAI2Q9Y5P3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RAI2Q9Y5P3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
RAI2Q9Y5P3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 AC069335.1-201ENST00000489972 472 ntBASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 AC105233.2-201ENST00000523697 349 ntBASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 AF228730.5-201ENST00000530288 346 ntBASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 KRT8P23-201ENST00000560090 1207 ntBASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 AC004835.2-201ENST00000603762 682 ntBASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 UXT-AS1-201ENST00000590504 1525 ntBASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RAI2Q9Y5P3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms