Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 PRSS29P-201ENST00000440800 595 ntBASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 CXCL1P1-201ENST00000502804 216 ntBASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 UNC93B6-202ENST00000528242 690 ntBASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 MIR4515-201ENST00000584082 81 ntBASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 LINC01144-201ENST00000626198 1710 ntBASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 AC099063.4-201ENST00000641099 1602 ntBASIC16.05■□□□□ 0.16
RNF11Q9Y3C5 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 HMGA1P7-201ENST00000406908 502 ntBASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 AC009947.1-201ENST00000444350 727 ntBASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 AP001005.1-201ENST00000571755 1248 ntBASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 SLC25A6P4-201ENST00000586535 553 ntBASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RNF11Q9Y3C5 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF11Q9Y3C5 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms