Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC19.67■□□□□ 0.74
ZC3H4Q9UPT8 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.67■□□□□ 0.74
ZC3H4Q9UPT8 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC19.67■□□□□ 0.74
ZC3H4Q9UPT8 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.67■□□□□ 0.74
ZC3H4Q9UPT8 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZC3H4Q9UPT8 AC009542.2-202ENST00000619004 1067 ntBASIC19.67■□□□□ 0.74
ZC3H4Q9UPT8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZC3H4Q9UPT8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.67■□□□□ 0.74
ZC3H4Q9UPT8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZC3H4Q9UPT8 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZC3H4Q9UPT8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZC3H4Q9UPT8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.67■□□□□ 0.74
ZC3H4Q9UPT8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 PCDHA12-202ENST00000613593 2588 ntBASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 FAM86HP-204ENST00000513466 959 ntBASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 BRI3BPP1-201ENST00000594224 787 ntBASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 AL022328.3-201ENST00000607943 679 ntBASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 SNX1-214ENST00000625244 324 ntTSL 5 BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZC3H4Q9UPT8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 FXNP2-201ENST00000411625 547 ntBASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 AC079328.1-201ENST00000560358 952 ntBASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 NAT9-224ENST00000583757 583 ntTSL 3 BASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 AC020765.3-201ENST00000613051 740 ntBASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 AL021578.1-201ENST00000613646 709 ntBASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 AC008687.7-202ENST00000637404 953 ntBASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H4Q9UPT8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.64■□□□□ 0.74
ZC3H4Q9UPT8 AC093525.9-201ENST00000624961 1746 ntBASIC19.64■□□□□ 0.74
ZC3H4Q9UPT8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZC3H4Q9UPT8 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ZC3H4Q9UPT8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.64■□□□□ 0.74
ZC3H4Q9UPT8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ZC3H4Q9UPT8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.64■□□□□ 0.74
ZC3H4Q9UPT8 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZC3H4Q9UPT8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.64■□□□□ 0.73
ZC3H4Q9UPT8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ZC3H4Q9UPT8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZC3H4Q9UPT8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZC3H4Q9UPT8 MGST3-203ENST00000367885 680 ntTSL 2 BASIC19.64■□□□□ 0.73
ZC3H4Q9UPT8 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
ZC3H4Q9UPT8 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.64■□□□□ 0.73
ZC3H4Q9UPT8 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC19.64■□□□□ 0.73
ZC3H4Q9UPT8 AL118558.3-201ENST00000607414 1079 ntBASIC19.64■□□□□ 0.73
ZC3H4Q9UPT8 AL158212.4-201ENST00000624062 1286 ntBASIC19.64■□□□□ 0.73
ZC3H4Q9UPT8 RHOXF1P1-202ENST00000635473 501 ntBASIC19.64■□□□□ 0.73
ZC3H4Q9UPT8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
ZC3H4Q9UPT8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ZC3H4Q9UPT8 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.64■□□□□ 0.73
ZC3H4Q9UPT8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZC3H4Q9UPT8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZC3H4Q9UPT8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZC3H4Q9UPT8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZC3H4Q9UPT8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZC3H4Q9UPT8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms