Protein–RNA interactions for Protein: Q9UNN4

GTF2A1L, TFIIA-alpha and beta-like factor, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1LQ9UNN4 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 AL139288.1-201ENST00000623748 933 ntBASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GTF2A1LQ9UNN4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 KRT18P35-201ENST00000510488 1269 ntBASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 MTDHP3-201ENST00000594186 672 ntBASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 TOP3BP1-201ENST00000420768 1380 ntBASIC14.72□□□□□ -0.05
GTF2A1LQ9UNN4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 AC013467.2-201ENST00000605472 835 ntBASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 AL139424.1-201ENST00000607572 797 ntBASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GTF2A1LQ9UNN4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms