Protein–RNA interactions for Protein: Q9NXL2

ARHGEF38, Rho guanine nucleotide exchange factor 38, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF38Q9NXL2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 AC004967.1-201ENST00000453589 447 ntBASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 AP000344.2-201ENST00000512987 629 ntBASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 AL138918.1-201ENST00000568306 659 ntBASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 AC073389.1-201ENST00000595595 795 ntBASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 AC008267.7-201ENST00000624570 1194 ntBASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF38Q9NXL2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 AC254562.1-201ENST00000417586 456 ntBASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 AC139530.3-201ENST00000620344 690 ntBASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF38Q9NXL2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF38Q9NXL2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF38Q9NXL2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF38Q9NXL2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.08■□□□□ 0.33
ARHGEF38Q9NXL2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.08■□□□□ 0.33
ARHGEF38Q9NXL2 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
ARHGEF38Q9NXL2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF38Q9NXL2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
ARHGEF38Q9NXL2 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF38Q9NXL2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ARHGEF38Q9NXL2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ARHGEF38Q9NXL2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF38Q9NXL2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF38Q9NXL2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF38Q9NXL2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF38Q9NXL2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
ARHGEF38Q9NXL2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ARHGEF38Q9NXL2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF38Q9NXL2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF38Q9NXL2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF38Q9NXL2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms