Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.48■□□□□ 0.39
CISHQ9NSE2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CISHQ9NSE2 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.48■□□□□ 0.39
CISHQ9NSE2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.48■□□□□ 0.39
CISHQ9NSE2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.48■□□□□ 0.39
CISHQ9NSE2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.48■□□□□ 0.39
CISHQ9NSE2 AC093520.2-201ENST00000561830 333 ntBASIC17.48■□□□□ 0.39
CISHQ9NSE2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.48■□□□□ 0.39
CISHQ9NSE2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.48■□□□□ 0.39
CISHQ9NSE2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.48■□□□□ 0.39
CISHQ9NSE2 SPTSSB-204ENST00000617024 1292 ntBASIC17.48■□□□□ 0.39
CISHQ9NSE2 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CISHQ9NSE2 AC084121.4-201ENST00000641598 221 ntBASIC17.48■□□□□ 0.39
CISHQ9NSE2 AF228730.8-201ENST00000642140 221 ntBASIC17.48■□□□□ 0.39
CISHQ9NSE2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CISHQ9NSE2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CISHQ9NSE2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CISHQ9NSE2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CISHQ9NSE2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CISHQ9NSE2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.48■□□□□ 0.39
CISHQ9NSE2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.48■□□□□ 0.39
CISHQ9NSE2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.48■□□□□ 0.39
CISHQ9NSE2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
CISHQ9NSE2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CISHQ9NSE2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
CISHQ9NSE2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.48■□□□□ 0.39
CISHQ9NSE2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CISHQ9NSE2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CISHQ9NSE2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CISHQ9NSE2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.48■□□□□ 0.39
CISHQ9NSE2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CISHQ9NSE2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.47■□□□□ 0.39
CISHQ9NSE2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CISHQ9NSE2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.47■□□□□ 0.39
CISHQ9NSE2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CISHQ9NSE2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CISHQ9NSE2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CISHQ9NSE2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CISHQ9NSE2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CISHQ9NSE2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CISHQ9NSE2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CISHQ9NSE2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.47■□□□□ 0.39
CISHQ9NSE2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.47■□□□□ 0.39
CISHQ9NSE2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CISHQ9NSE2 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.47■□□□□ 0.39
CISHQ9NSE2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
CISHQ9NSE2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CISHQ9NSE2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CISHQ9NSE2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CISHQ9NSE2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.47■□□□□ 0.39
CISHQ9NSE2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CISHQ9NSE2 AC254562.1-201ENST00000417586 456 ntBASIC17.47■□□□□ 0.39
CISHQ9NSE2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.47■□□□□ 0.39
CISHQ9NSE2 AC005237.2-201ENST00000434368 219 ntBASIC17.47■□□□□ 0.39
CISHQ9NSE2 AC098859.1-201ENST00000502915 1238 ntBASIC17.47■□□□□ 0.39
CISHQ9NSE2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CISHQ9NSE2 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CISHQ9NSE2 AC004835.2-201ENST00000603762 682 ntBASIC17.47■□□□□ 0.39
CISHQ9NSE2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CISHQ9NSE2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CISHQ9NSE2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CISHQ9NSE2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CISHQ9NSE2 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CISHQ9NSE2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CISHQ9NSE2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CISHQ9NSE2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CISHQ9NSE2 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CISHQ9NSE2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CISHQ9NSE2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CISHQ9NSE2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.46■□□□□ 0.39
CISHQ9NSE2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CISHQ9NSE2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CISHQ9NSE2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.46■□□□□ 0.39
CISHQ9NSE2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CISHQ9NSE2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
CISHQ9NSE2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CISHQ9NSE2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CISHQ9NSE2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CISHQ9NSE2 AL627223.1-201ENST00000416693 442 ntBASIC17.46■□□□□ 0.39
CISHQ9NSE2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CISHQ9NSE2 SLC25A39P2-201ENST00000537614 270 ntBASIC17.46■□□□□ 0.39
CISHQ9NSE2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CISHQ9NSE2 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CISHQ9NSE2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CISHQ9NSE2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CISHQ9NSE2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.46■□□□□ 0.39
CISHQ9NSE2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CISHQ9NSE2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CISHQ9NSE2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CISHQ9NSE2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CISHQ9NSE2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CISHQ9NSE2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CISHQ9NSE2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CISHQ9NSE2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.46■□□□□ 0.39
CISHQ9NSE2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.46■□□□□ 0.39
CISHQ9NSE2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CISHQ9NSE2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CISHQ9NSE2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CISHQ9NSE2 DOC2GP-204ENST00000639052 2548 ntBASIC17.46■□□□□ 0.38
CISHQ9NSE2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms