Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.31■□□□□ 0.36
TLR9Q9NR96 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.31■□□□□ 0.36
TLR9Q9NR96 CTBP2P3-201ENST00000585629 1255 ntBASIC17.31■□□□□ 0.36
TLR9Q9NR96 AC093726.1-201ENST00000608064 963 ntBASIC17.31■□□□□ 0.36
TLR9Q9NR96 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TLR9Q9NR96 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TLR9Q9NR96 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TLR9Q9NR96 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TLR9Q9NR96 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TLR9Q9NR96 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TLR9Q9NR96 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TLR9Q9NR96 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.31■□□□□ 0.36
TLR9Q9NR96 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TLR9Q9NR96 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TLR9Q9NR96 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TLR9Q9NR96 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TLR9Q9NR96 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TLR9Q9NR96 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.3■□□□□ 0.36
TLR9Q9NR96 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TLR9Q9NR96 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TLR9Q9NR96 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TLR9Q9NR96 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TLR9Q9NR96 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TLR9Q9NR96 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TLR9Q9NR96 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.3■□□□□ 0.36
TLR9Q9NR96 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.3■□□□□ 0.36
TLR9Q9NR96 AL589987.1-201ENST00000453380 819 ntBASIC17.3■□□□□ 0.36
TLR9Q9NR96 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.3■□□□□ 0.36
TLR9Q9NR96 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.3■□□□□ 0.36
TLR9Q9NR96 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.3■□□□□ 0.36
TLR9Q9NR96 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.3■□□□□ 0.36
TLR9Q9NR96 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.3■□□□□ 0.36
TLR9Q9NR96 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TLR9Q9NR96 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.3■□□□□ 0.36
TLR9Q9NR96 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.3■□□□□ 0.36
TLR9Q9NR96 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.3■□□□□ 0.36
TLR9Q9NR96 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TLR9Q9NR96 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TLR9Q9NR96 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TLR9Q9NR96 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.3■□□□□ 0.36
TLR9Q9NR96 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TLR9Q9NR96 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.3■□□□□ 0.36
TLR9Q9NR96 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TLR9Q9NR96 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TLR9Q9NR96 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TLR9Q9NR96 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TLR9Q9NR96 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TLR9Q9NR96 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TLR9Q9NR96 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TLR9Q9NR96 AL391256.1-201ENST00000443260 1855 ntBASIC17.29■□□□□ 0.36
TLR9Q9NR96 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TLR9Q9NR96 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TLR9Q9NR96 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TLR9Q9NR96 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TLR9Q9NR96 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 AL139010.1-201ENST00000454878 894 ntBASIC17.29■□□□□ 0.36
TLR9Q9NR96 AP002490.2-201ENST00000524791 560 ntBASIC17.29■□□□□ 0.36
TLR9Q9NR96 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 AL512343.1-201ENST00000605837 169 ntBASIC17.29■□□□□ 0.36
TLR9Q9NR96 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TLR9Q9NR96 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TLR9Q9NR96 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TLR9Q9NR96 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TLR9Q9NR96 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
TLR9Q9NR96 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TLR9Q9NR96 TNRC18P3-201ENST00000441896 2691 ntBASIC17.29■□□□□ 0.36
TLR9Q9NR96 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TLR9Q9NR96 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TLR9Q9NR96 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TLR9Q9NR96 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TLR9Q9NR96 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TLR9Q9NR96 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.29■□□□□ 0.36
TLR9Q9NR96 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TLR9Q9NR96 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms