Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 AC004461.1-201ENST00000412461 403 ntBASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 AL592309.1-201ENST00000443127 649 ntBASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 AC006449.5-201ENST00000610658 2098 ntBASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 ALOX12P2-203ENST00000570921 1945 ntBASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 AC093724.1-201ENST00000448659 1027 ntBASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 IGHV3-62-201ENST00000520057 340 ntBASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 KRT8P23-201ENST00000560090 1207 ntBASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 AC008267.7-201ENST00000624570 1194 ntBASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRDM9Q9NQV7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms