Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 TNRC18P2-201ENST00000417666 2714 ntBASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 TERF1P1-201ENST00000311003 1181 ntBASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 TSPY22P-201ENST00000427496 604 ntBASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 AC009533.2-201ENST00000543664 586 ntBASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 AC090616.6-201ENST00000582640 721 ntBASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 IGHV3-41-201ENST00000613121 348 ntBASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 AC073592.5-201ENST00000624854 528 ntBASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 PC-204ENST00000524491 1714 ntTSL 2 BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SND1-IT1Q9HBX3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 AC013268.4-201ENST00000637413 2228 ntBASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms