Protein–RNA interactions for Protein: Q9H4Q4

PRDM12, PR domain zinc finger protein 12, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM12Q9H4Q4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 MIR1908-201ENST00000410394 80 ntBASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 AL133215.2-201ENST00000609242 977 ntBASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PRDM12Q9H4Q4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 AC009053.2-201ENST00000563701 2365 ntBASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 AC008735.3-201ENST00000596646 500 ntBASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PRDM12Q9H4Q4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PRDM12Q9H4Q4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.71■□□□□ 0.42
PRDM12Q9H4Q4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.71■□□□□ 0.42
PRDM12Q9H4Q4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
PRDM12Q9H4Q4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRDM12Q9H4Q4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRDM12Q9H4Q4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.7■□□□□ 0.42
PRDM12Q9H4Q4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
PRDM12Q9H4Q4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.7■□□□□ 0.42
PRDM12Q9H4Q4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PRDM12Q9H4Q4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRDM12Q9H4Q4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.7■□□□□ 0.42
PRDM12Q9H4Q4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.7■□□□□ 0.42
PRDM12Q9H4Q4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRDM12Q9H4Q4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRDM12Q9H4Q4 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRDM12Q9H4Q4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.7■□□□□ 0.42
PRDM12Q9H4Q4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.7■□□□□ 0.42
PRDM12Q9H4Q4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PRDM12Q9H4Q4 PRYP6-201ENST00000514804 343 ntBASIC17.7■□□□□ 0.42
PRDM12Q9H4Q4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.7■□□□□ 0.42
PRDM12Q9H4Q4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.7■□□□□ 0.42
PRDM12Q9H4Q4 TPRX2P-201ENST00000535362 881 ntBASIC17.7■□□□□ 0.42
PRDM12Q9H4Q4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PRDM12Q9H4Q4 AC123567.1-201ENST00000548294 1261 ntBASIC17.7■□□□□ 0.42
PRDM12Q9H4Q4 AL512361.1-201ENST00000554200 418 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms