Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 AC140658.5-201ENST00000438532 169 ntBASIC14.67□□□□□ -0.06
NELFAQ9H3P2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 AP002472.1-201ENST00000577490 586 ntBASIC14.67□□□□□ -0.06
NELFAQ9H3P2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.67□□□□□ -0.06
NELFAQ9H3P2 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 AC006449.5-201ENST00000610658 2098 ntBASIC14.67□□□□□ -0.06
NELFAQ9H3P2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NELFAQ9H3P2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 AC079328.2-201ENST00000561241 3354 ntBASIC14.66□□□□□ -0.06
NELFAQ9H3P2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 MIR3909-201ENST00000579518 119 ntBASIC14.66□□□□□ -0.06
NELFAQ9H3P2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 AL031055.1-201ENST00000606362 631 ntBASIC14.66□□□□□ -0.06
NELFAQ9H3P2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NELFAQ9H3P2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 PCGF3-213ENST00000620529 1899 ntBASIC14.65□□□□□ -0.06
NELFAQ9H3P2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 GPX1P2-201ENST00000429271 606 ntBASIC14.65□□□□□ -0.06
NELFAQ9H3P2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
NELFAQ9H3P2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms