Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 HCG4B-203ENST00000450128 991 ntBASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 AL031055.1-201ENST00000606362 631 ntBASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 AC020765.3-201ENST00000613051 740 ntBASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 AC010507.1-201ENST00000633895 436 ntBASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 SLC9A7P1-201ENST00000554295 3311 ntBASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.62■□□□□ 0.73
UPF3BQ9BZI7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 AC005622.1-201ENST00000636801 1703 ntBASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 PRAL-201ENST00000624952 3286 ntBASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC19.61■□□□□ 0.73
UPF3BQ9BZI7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.6■□□□□ 0.73
UPF3BQ9BZI7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
UPF3BQ9BZI7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UPF3BQ9BZI7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPF3BQ9BZI7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
UPF3BQ9BZI7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
UPF3BQ9BZI7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.6■□□□□ 0.73
UPF3BQ9BZI7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
UPF3BQ9BZI7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.6■□□□□ 0.73
UPF3BQ9BZI7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.6■□□□□ 0.73
UPF3BQ9BZI7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPF3BQ9BZI7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPF3BQ9BZI7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPF3BQ9BZI7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UPF3BQ9BZI7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UPF3BQ9BZI7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPF3BQ9BZI7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
UPF3BQ9BZI7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
UPF3BQ9BZI7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPF3BQ9BZI7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPF3BQ9BZI7 AP003680.1-201ENST00000598970 3660 ntBASIC19.6■□□□□ 0.73
UPF3BQ9BZI7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.6■□□□□ 0.73
UPF3BQ9BZI7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.59■□□□□ 0.73
UPF3BQ9BZI7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UPF3BQ9BZI7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
UPF3BQ9BZI7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC19.59■□□□□ 0.73
UPF3BQ9BZI7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
UPF3BQ9BZI7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms