Protein–RNA interactions for Protein: Q9BY10

SLC46A2, Thymic stromal cotransporter homolog, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A2Q9BY10 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 AL391825.1-201ENST00000457671 1364 ntBASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 LETM1P2-201ENST00000597330 2178 ntBASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 AC087499.6-201ENST00000411576 835 ntBASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 AC093004.1-201ENST00000508850 424 ntBASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC46A2Q9BY10 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 AL589987.1-201ENST00000453380 819 ntBASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 MEIS3P1-201ENST00000495167 958 ntBASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 CYP4F24P-201ENST00000586049 1580 ntBASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SLC46A2Q9BY10 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 SLC7A15P-201ENST00000424028 1363 ntBASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 HIST3H2BA-201ENST00000436555 524 ntBASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 KRT17P7-201ENST00000451704 1104 ntBASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 AC008494.3-201ENST00000606615 944 ntBASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC46A2Q9BY10 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms