Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.03■□□□□ -0
RSPO3Q9BXY4 AC092865.6-201ENST00000642101 219 ntBASIC15.03■□□□□ -0
RSPO3Q9BXY4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.03■□□□□ -0
RSPO3Q9BXY4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.03■□□□□ -0
RSPO3Q9BXY4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RSPO3Q9BXY4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RSPO3Q9BXY4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.03■□□□□ -0
RSPO3Q9BXY4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.03■□□□□ -0
RSPO3Q9BXY4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.03■□□□□ -0
RSPO3Q9BXY4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.03■□□□□ -0
RSPO3Q9BXY4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RSPO3Q9BXY4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.03■□□□□ -0
RSPO3Q9BXY4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
RSPO3Q9BXY4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.03■□□□□ -0
RSPO3Q9BXY4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.03■□□□□ -0
RSPO3Q9BXY4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.03■□□□□ -0
RSPO3Q9BXY4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.03■□□□□ -0
RSPO3Q9BXY4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.03■□□□□ -0
RSPO3Q9BXY4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.03■□□□□ -0
RSPO3Q9BXY4 AC136621.1-201ENST00000624017 2304 ntBASIC15.03■□□□□ -0
RSPO3Q9BXY4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.03■□□□□ -0
RSPO3Q9BXY4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
RSPO3Q9BXY4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RSPO3Q9BXY4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
RSPO3Q9BXY4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RSPO3Q9BXY4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.02■□□□□ -0
RSPO3Q9BXY4 AL589702.1-201ENST00000641229 1509 ntBASIC15.02■□□□□ -0
RSPO3Q9BXY4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.02■□□□□ -0
RSPO3Q9BXY4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.02■□□□□ -0
RSPO3Q9BXY4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RSPO3Q9BXY4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.02■□□□□ -0
RSPO3Q9BXY4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RSPO3Q9BXY4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.02■□□□□ -0
RSPO3Q9BXY4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.02■□□□□ -0
RSPO3Q9BXY4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RSPO3Q9BXY4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.02■□□□□ -0
RSPO3Q9BXY4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RSPO3Q9BXY4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RSPO3Q9BXY4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RSPO3Q9BXY4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.02■□□□□ -0
RSPO3Q9BXY4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.02■□□□□ -0
RSPO3Q9BXY4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.02■□□□□ -0
RSPO3Q9BXY4 GPX1P2-201ENST00000429271 606 ntBASIC15.02■□□□□ -0
RSPO3Q9BXY4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.02■□□□□ -0
RSPO3Q9BXY4 AC007967.2-201ENST00000432613 625 ntBASIC15.02■□□□□ -0
RSPO3Q9BXY4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.02■□□□□ -0
RSPO3Q9BXY4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.02■□□□□ -0
RSPO3Q9BXY4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.02■□□□□ -0
RSPO3Q9BXY4 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.02■□□□□ -0
RSPO3Q9BXY4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.02■□□□□ -0
RSPO3Q9BXY4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
RSPO3Q9BXY4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.02□□□□□ -0.01
RSPO3Q9BXY4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RSPO3Q9BXY4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
RSPO3Q9BXY4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.02□□□□□ -0.01
RSPO3Q9BXY4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RSPO3Q9BXY4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
RSPO3Q9BXY4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
RSPO3Q9BXY4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.02□□□□□ -0.01
RSPO3Q9BXY4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RSPO3Q9BXY4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.02□□□□□ -0.01
RSPO3Q9BXY4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.02□□□□□ -0.01
RSPO3Q9BXY4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.02□□□□□ -0.01
RSPO3Q9BXY4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
RSPO3Q9BXY4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.02□□□□□ -0.01
RSPO3Q9BXY4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RSPO3Q9BXY4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RSPO3Q9BXY4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 AC022532.1-201ENST00000624563 1728 ntBASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 BCAR1-209ENST00000546196 1340 ntBASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 CICP13-201ENST00000422015 2789 ntBASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 FDX1P1-201ENST00000449115 551 ntBASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 SLC25A1P1-201ENST00000528351 927 ntBASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 AL662844.1-201ENST00000546340 181 ntBASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 AP002472.1-201ENST00000577490 586 ntBASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RSPO3Q9BXY4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms