Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 FOXO1B-201ENST00000504678 1527 ntBASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 HLA-J-203ENST00000494367 1087 ntBASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 RNA5SP410-201ENST00000516285 106 ntBASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 AC025678.2-201ENST00000562061 970 ntBASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM62Q9BVG3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 FAM58DP-201ENST00000428076 619 ntBASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 AL353705.2-201ENST00000428243 662 ntBASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 MIR4321-201ENST00000592276 80 ntBASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 AC026979.3-201ENST00000607315 403 ntBASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 MTHFR-217ENST00000641820 1569 ntBASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
TRIM62Q9BVG3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM62Q9BVG3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRIM62Q9BVG3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.05■□□□□ 0.32
TRIM62Q9BVG3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM62Q9BVG3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM62Q9BVG3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM62Q9BVG3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM62Q9BVG3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM62Q9BVG3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
TRIM62Q9BVG3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM62Q9BVG3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRIM62Q9BVG3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRIM62Q9BVG3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms