Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 STX3-203ENST00000529177 1571 ntTSL 2 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 AC139887.3-201ENST00000568585 713 ntBASIC9.86□□□□□ -0.83
LIMD2Q9BT23 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 NID2-208ENST00000617139 3827 ntTSL 5 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 R3HDM2P2-201ENST00000401880 2116 ntBASIC9.86□□□□□ -0.83
LIMD2Q9BT23 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 AC104581.4-201ENST00000623126 3052 ntBASIC9.86□□□□□ -0.83
LIMD2Q9BT23 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 MED16-201ENST00000269814 1199 ntTSL 5 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 EMD-201ENST00000369835 966 ntTSL 3 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 HIST2H3DP1-201ENST00000401004 416 ntBASIC9.85□□□□□ -0.83
LIMD2Q9BT23 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC9.85□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms