Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AL355864.2-201ENST00000447420 863 ntBASIC16.87■□□□□ 0.29
CDCA3Q99618 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDCA3Q99618 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.87■□□□□ 0.29
CDCA3Q99618 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.87■□□□□ 0.29
CDCA3Q99618 AC068587.3-201ENST00000526613 355 ntBASIC16.87■□□□□ 0.29
CDCA3Q99618 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.87■□□□□ 0.29
CDCA3Q99618 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.87■□□□□ 0.29
CDCA3Q99618 AC079316.1-201ENST00000548397 411 ntBASIC16.87■□□□□ 0.29
CDCA3Q99618 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.87■□□□□ 0.29
CDCA3Q99618 AL359711.2-201ENST00000563105 872 ntBASIC16.87■□□□□ 0.29
CDCA3Q99618 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.87■□□□□ 0.29
CDCA3Q99618 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.87■□□□□ 0.29
CDCA3Q99618 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.87■□□□□ 0.29
CDCA3Q99618 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDCA3Q99618 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDCA3Q99618 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDCA3Q99618 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDCA3Q99618 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.87■□□□□ 0.29
CDCA3Q99618 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDCA3Q99618 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDCA3Q99618 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDCA3Q99618 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDCA3Q99618 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDCA3Q99618 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDCA3Q99618 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDCA3Q99618 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CDCA3Q99618 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDCA3Q99618 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDCA3Q99618 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.86■□□□□ 0.29
CDCA3Q99618 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.86■□□□□ 0.29
CDCA3Q99618 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDCA3Q99618 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDCA3Q99618 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDCA3Q99618 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDCA3Q99618 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDCA3Q99618 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDCA3Q99618 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDCA3Q99618 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.86■□□□□ 0.29
CDCA3Q99618 SOCS2P1-201ENST00000417727 557 ntBASIC16.86■□□□□ 0.29
CDCA3Q99618 AC134915.1-201ENST00000426461 574 ntBASIC16.86■□□□□ 0.29
CDCA3Q99618 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.86■□□□□ 0.29
CDCA3Q99618 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.86■□□□□ 0.29
CDCA3Q99618 BCRP2-202ENST00000447763 634 ntBASIC16.86■□□□□ 0.29
CDCA3Q99618 BCRP6-201ENST00000510112 632 ntBASIC16.86■□□□□ 0.29
CDCA3Q99618 BCRP7-201ENST00000511549 544 ntBASIC16.86■□□□□ 0.29
CDCA3Q99618 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDCA3Q99618 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.86■□□□□ 0.29
CDCA3Q99618 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.86■□□□□ 0.29
CDCA3Q99618 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.86■□□□□ 0.29
CDCA3Q99618 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.86■□□□□ 0.29
CDCA3Q99618 AC243562.2-201ENST00000561247 970 ntBASIC16.86■□□□□ 0.29
CDCA3Q99618 AC009486.1-201ENST00000569860 813 ntBASIC16.86■□□□□ 0.29
CDCA3Q99618 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDCA3Q99618 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.86■□□□□ 0.29
CDCA3Q99618 AC068587.10-201ENST00000641210 219 ntBASIC16.86■□□□□ 0.29
CDCA3Q99618 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDCA3Q99618 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CDCA3Q99618 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDCA3Q99618 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDCA3Q99618 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDCA3Q99618 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDCA3Q99618 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CDCA3Q99618 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.86■□□□□ 0.29
CDCA3Q99618 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.86■□□□□ 0.29
CDCA3Q99618 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDCA3Q99618 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDCA3Q99618 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
CDCA3Q99618 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CDCA3Q99618 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA3Q99618 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA3Q99618 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA3Q99618 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA3Q99618 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDCA3Q99618 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA3Q99618 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.85■□□□□ 0.29
CDCA3Q99618 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA3Q99618 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA3Q99618 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA3Q99618 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDCA3Q99618 HAUS4P1-201ENST00000406739 1145 ntBASIC16.85■□□□□ 0.29
CDCA3Q99618 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.85■□□□□ 0.29
CDCA3Q99618 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CDCA3Q99618 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.85■□□□□ 0.29
CDCA3Q99618 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA3Q99618 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.85■□□□□ 0.29
CDCA3Q99618 AP001889.1-201ENST00000525414 633 ntBASIC16.85■□□□□ 0.29
CDCA3Q99618 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA3Q99618 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA3Q99618 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.85■□□□□ 0.29
CDCA3Q99618 AC244093.1-201ENST00000610837 814 ntBASIC16.85■□□□□ 0.29
CDCA3Q99618 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.85■□□□□ 0.29
CDCA3Q99618 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA3Q99618 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.85■□□□□ 0.29
CDCA3Q99618 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.85■□□□□ 0.29
CDCA3Q99618 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDCA3Q99618 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CDCA3Q99618 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA3Q99618 AL691432.1-201ENST00000596308 1422 ntBASIC16.85■□□□□ 0.29
CDCA3Q99618 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA3Q99618 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms