Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 AC002056.1-201ENST00000395613 760 ntBASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 AL513190.1-201ENST00000621254 727 ntBASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MS4A4EQ96PG1 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MS4A4EQ96PG1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MS4A4EQ96PG1 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
MS4A4EQ96PG1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
MS4A4EQ96PG1 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MS4A4EQ96PG1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.33■□□□□ 0.05
MS4A4EQ96PG1 AL592424.1-201ENST00000563624 1536 ntBASIC15.33■□□□□ 0.05
MS4A4EQ96PG1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.33■□□□□ 0.05
MS4A4EQ96PG1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MS4A4EQ96PG1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MS4A4EQ96PG1 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MS4A4EQ96PG1 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MS4A4EQ96PG1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
MS4A4EQ96PG1 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
MS4A4EQ96PG1 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 AC112191.1-201ENST00000523689 701 ntBASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 PCDHA1-201ENST00000378133 2726 ntBASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 WASH6P-202ENST00000359512 1437 ntBASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MS4A4EQ96PG1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 AC093724.1-201ENST00000448659 1027 ntBASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.32■□□□□ 0.04
MS4A4EQ96PG1 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms