Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL21A1Q96P44 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COL21A1Q96P44 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.58■□□□□ 0.08
COL21A1Q96P44 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL21A1Q96P44 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.58■□□□□ 0.08
COL21A1Q96P44 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.58■□□□□ 0.08
COL21A1Q96P44 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL21A1Q96P44 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL21A1Q96P44 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
COL21A1Q96P44 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL21A1Q96P44 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
COL21A1Q96P44 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL21A1Q96P44 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.57■□□□□ 0.08
COL21A1Q96P44 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL21A1Q96P44 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL21A1Q96P44 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL21A1Q96P44 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL21A1Q96P44 SNX33P1-201ENST00000592116 1762 ntBASIC15.57■□□□□ 0.08
COL21A1Q96P44 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.57■□□□□ 0.08
COL21A1Q96P44 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.57■□□□□ 0.08
COL21A1Q96P44 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL21A1Q96P44 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL21A1Q96P44 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL21A1Q96P44 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL21A1Q96P44 MED15P5-201ENST00000423150 992 ntBASIC15.57■□□□□ 0.08
COL21A1Q96P44 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.57■□□□□ 0.08
COL21A1Q96P44 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.57■□□□□ 0.08
COL21A1Q96P44 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.57■□□□□ 0.08
COL21A1Q96P44 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
COL21A1Q96P44 AC091167.2-201ENST00000579581 588 ntBASIC15.57■□□□□ 0.08
COL21A1Q96P44 AC005412.3-201ENST00000580309 715 ntBASIC15.57■□□□□ 0.08
COL21A1Q96P44 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.57■□□□□ 0.08
COL21A1Q96P44 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.57■□□□□ 0.08
COL21A1Q96P44 FAM197Y3-203ENST00000618346 717 ntBASIC15.57■□□□□ 0.08
COL21A1Q96P44 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL21A1Q96P44 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.57■□□□□ 0.08
COL21A1Q96P44 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL21A1Q96P44 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL21A1Q96P44 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.57■□□□□ 0.08
COL21A1Q96P44 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
COL21A1Q96P44 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.57■□□□□ 0.08
COL21A1Q96P44 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL21A1Q96P44 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
COL21A1Q96P44 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL21A1Q96P44 GGT3P-204ENST00000453783 1664 ntBASIC15.57■□□□□ 0.08
COL21A1Q96P44 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL21A1Q96P44 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.57■□□□□ 0.08
COL21A1Q96P44 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
COL21A1Q96P44 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.57■□□□□ 0.08
COL21A1Q96P44 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.57■□□□□ 0.08
COL21A1Q96P44 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL21A1Q96P44 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.57■□□□□ 0.08
COL21A1Q96P44 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL21A1Q96P44 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL21A1Q96P44 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
COL21A1Q96P44 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
COL21A1Q96P44 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.56■□□□□ 0.08
COL21A1Q96P44 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.56■□□□□ 0.08
COL21A1Q96P44 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL21A1Q96P44 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COL21A1Q96P44 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
COL21A1Q96P44 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
COL21A1Q96P44 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL21A1Q96P44 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL21A1Q96P44 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL21A1Q96P44 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL21A1Q96P44 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL21A1Q96P44 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.56■□□□□ 0.08
COL21A1Q96P44 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL21A1Q96P44 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
COL21A1Q96P44 IGLL3P-201ENST00000412472 434 ntBASIC15.56■□□□□ 0.08
COL21A1Q96P44 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.56■□□□□ 0.08
COL21A1Q96P44 RNA5SP416-201ENST00000516838 111 ntBASIC15.56■□□□□ 0.08
COL21A1Q96P44 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COL21A1Q96P44 KRT18P58-201ENST00000527480 1120 ntBASIC15.56■□□□□ 0.08
COL21A1Q96P44 AC140113.2-201ENST00000604370 208 ntBASIC15.56■□□□□ 0.08
COL21A1Q96P44 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.56■□□□□ 0.08
COL21A1Q96P44 AL353732.1-201ENST00000569618 1459 ntBASIC15.56■□□□□ 0.08
COL21A1Q96P44 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COL21A1Q96P44 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL21A1Q96P44 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL21A1Q96P44 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COL21A1Q96P44 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.56■□□□□ 0.08
COL21A1Q96P44 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.56■□□□□ 0.08
COL21A1Q96P44 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
COL21A1Q96P44 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COL21A1Q96P44 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.56■□□□□ 0.08
COL21A1Q96P44 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL21A1Q96P44 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.56■□□□□ 0.08
COL21A1Q96P44 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL21A1Q96P44 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL21A1Q96P44 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL21A1Q96P44 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL21A1Q96P44 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL21A1Q96P44 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL21A1Q96P44 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL21A1Q96P44 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms