Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 RN7SL692P-201ENST00000464677 288 ntBASIC16.42■□□□□ 0.22
SIPA1Q96FS4 RN7SL618P-201ENST00000477850 296 ntBASIC16.42■□□□□ 0.22
SIPA1Q96FS4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SIPA1Q96FS4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIPA1Q96FS4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.42■□□□□ 0.22
SIPA1Q96FS4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.42■□□□□ 0.22
SIPA1Q96FS4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.42■□□□□ 0.22
SIPA1Q96FS4 AL596325.1-201ENST00000563991 1082 ntBASIC16.42■□□□□ 0.22
SIPA1Q96FS4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.42■□□□□ 0.22
SIPA1Q96FS4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIPA1Q96FS4 AC026979.3-201ENST00000607315 403 ntBASIC16.42■□□□□ 0.22
SIPA1Q96FS4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIPA1Q96FS4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIPA1Q96FS4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIPA1Q96FS4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.42■□□□□ 0.22
SIPA1Q96FS4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIPA1Q96FS4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.42■□□□□ 0.22
SIPA1Q96FS4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.42■□□□□ 0.22
SIPA1Q96FS4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
SIPA1Q96FS4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIPA1Q96FS4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SIPA1Q96FS4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIPA1Q96FS4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
SIPA1Q96FS4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIPA1Q96FS4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIPA1Q96FS4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIPA1Q96FS4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 GK-202ENST00000378941 458 ntTSL 3 BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 AC135586.1-201ENST00000539323 574 ntBASIC16.41■□□□□ 0.22
SIPA1Q96FS4 CR383656.12-201ENST00000549567 513 ntBASIC16.41■□□□□ 0.22
SIPA1Q96FS4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 AC007541.1-201ENST00000570282 1469 ntBASIC16.41■□□□□ 0.22
SIPA1Q96FS4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIPA1Q96FS4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 NME2P1-201ENST00000426182 414 ntBASIC16.4■□□□□ 0.22
SIPA1Q96FS4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 AL132655.2-201ENST00000596276 594 ntBASIC16.4■□□□□ 0.22
SIPA1Q96FS4 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.4■□□□□ 0.22
SIPA1Q96FS4 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.4■□□□□ 0.22
SIPA1Q96FS4 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.4■□□□□ 0.22
SIPA1Q96FS4 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.4■□□□□ 0.22
SIPA1Q96FS4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 AC004840.1-201ENST00000636359 365 ntBASIC16.4■□□□□ 0.22
SIPA1Q96FS4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms