Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX11Q96FC9 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.51■□□□□ 0.71
DDX11Q96FC9 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX11Q96FC9 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
DDX11Q96FC9 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX11Q96FC9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX11Q96FC9 PCDHA1-201ENST00000378133 2726 ntBASIC19.51■□□□□ 0.71
DDX11Q96FC9 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX11Q96FC9 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX11Q96FC9 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX11Q96FC9 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX11Q96FC9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
DDX11Q96FC9 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX11Q96FC9 AL671277.1-201ENST00000429656 993 ntBASIC19.51■□□□□ 0.71
DDX11Q96FC9 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX11Q96FC9 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.51■□□□□ 0.71
DDX11Q96FC9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.51■□□□□ 0.71
DDX11Q96FC9 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
DDX11Q96FC9 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.51■□□□□ 0.71
DDX11Q96FC9 AC025678.2-201ENST00000562061 970 ntBASIC19.51■□□□□ 0.71
DDX11Q96FC9 AC091167.2-201ENST00000579581 588 ntBASIC19.51■□□□□ 0.71
DDX11Q96FC9 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.51■□□□□ 0.71
DDX11Q96FC9 CYP2A7P1-201ENST00000595391 815 ntBASIC19.51■□□□□ 0.71
DDX11Q96FC9 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
DDX11Q96FC9 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
DDX11Q96FC9 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.51■□□□□ 0.71
DDX11Q96FC9 AL031731.1-201ENST00000642131 2094 ntBASIC19.51■□□□□ 0.71
DDX11Q96FC9 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX11Q96FC9 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX11Q96FC9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX11Q96FC9 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.51■□□□□ 0.71
DDX11Q96FC9 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX11Q96FC9 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
DDX11Q96FC9 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
DDX11Q96FC9 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.51■□□□□ 0.71
DDX11Q96FC9 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.51■□□□□ 0.71
DDX11Q96FC9 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX11Q96FC9 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
DDX11Q96FC9 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX11Q96FC9 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.51■□□□□ 0.71
DDX11Q96FC9 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX11Q96FC9 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
DDX11Q96FC9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.51■□□□□ 0.71
DDX11Q96FC9 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX11Q96FC9 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.5■□□□□ 0.71
DDX11Q96FC9 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
DDX11Q96FC9 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX11Q96FC9 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
DDX11Q96FC9 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.5■□□□□ 0.71
DDX11Q96FC9 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.5■□□□□ 0.71
DDX11Q96FC9 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX11Q96FC9 AL353732.1-201ENST00000569618 1459 ntBASIC19.5■□□□□ 0.71
DDX11Q96FC9 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.5■□□□□ 0.71
DDX11Q96FC9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
DDX11Q96FC9 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.5■□□□□ 0.71
DDX11Q96FC9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.5■□□□□ 0.71
DDX11Q96FC9 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
DDX11Q96FC9 HLA-J-203ENST00000494367 1087 ntBASIC19.5■□□□□ 0.71
DDX11Q96FC9 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.5■□□□□ 0.71
DDX11Q96FC9 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.5■□□□□ 0.71
DDX11Q96FC9 MIR3197-201ENST00000582241 73 ntBASIC19.5■□□□□ 0.71
DDX11Q96FC9 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.5■□□□□ 0.71
DDX11Q96FC9 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.5■□□□□ 0.71
DDX11Q96FC9 AC026120.1-201ENST00000611536 926 ntBASIC19.5■□□□□ 0.71
DDX11Q96FC9 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.5■□□□□ 0.71
DDX11Q96FC9 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
DDX11Q96FC9 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDX11Q96FC9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX11Q96FC9 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX11Q96FC9 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX11Q96FC9 KRT8P39-201ENST00000396270 1433 ntBASIC19.5■□□□□ 0.71
DDX11Q96FC9 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDX11Q96FC9 AL391005.1-201ENST00000623953 2435 ntBASIC19.5■□□□□ 0.71
DDX11Q96FC9 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.5■□□□□ 0.71
DDX11Q96FC9 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
DDX11Q96FC9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDX11Q96FC9 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.49■□□□□ 0.71
DDX11Q96FC9 GGT3P-204ENST00000453783 1664 ntBASIC19.49■□□□□ 0.71
DDX11Q96FC9 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.49■□□□□ 0.71
DDX11Q96FC9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX11Q96FC9 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX11Q96FC9 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX11Q96FC9 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
DDX11Q96FC9 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX11Q96FC9 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX11Q96FC9 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DDX11Q96FC9 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX11Q96FC9 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX11Q96FC9 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX11Q96FC9 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.49■□□□□ 0.71
DDX11Q96FC9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.49■□□□□ 0.71
DDX11Q96FC9 GGT4P-201ENST00000623672 1708 ntBASIC19.49■□□□□ 0.71
DDX11Q96FC9 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
DDX11Q96FC9 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX11Q96FC9 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
DDX11Q96FC9 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX11Q96FC9 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX11Q96FC9 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DDX11Q96FC9 AC023141.5-201ENST00000458585 616 ntBASIC19.49■□□□□ 0.71
DDX11Q96FC9 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms