Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 SPDYE21P-201ENST00000413323 827 ntBASIC14.29□□□□□ -0.12
CCDC107Q8WV48 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 ABCD1P5-201ENST00000445663 754 ntBASIC14.29□□□□□ -0.12
CCDC107Q8WV48 NUS1P1-201ENST00000446295 882 ntBASIC14.29□□□□□ -0.12
CCDC107Q8WV48 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 ATP5G2P1-201ENST00000433580 426 ntBASIC14.28□□□□□ -0.12
CCDC107Q8WV48 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 AC010331.1-201ENST00000611423 582 ntBASIC14.28□□□□□ -0.12
CCDC107Q8WV48 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC107Q8WV48 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC107Q8WV48 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC107Q8WV48 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC107Q8WV48 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC107Q8WV48 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
CCDC107Q8WV48 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
CCDC107Q8WV48 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC107Q8WV48 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC107Q8WV48 FAM45BP-202ENST00000592932 1624 ntBASIC14.27□□□□□ -0.12
CCDC107Q8WV48 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.27□□□□□ -0.12
CCDC107Q8WV48 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC107Q8WV48 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC107Q8WV48 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC107Q8WV48 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC107Q8WV48 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC107Q8WV48 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC107Q8WV48 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC107Q8WV48 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC107Q8WV48 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC107Q8WV48 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
CCDC107Q8WV48 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC107Q8WV48 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC107Q8WV48 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.27□□□□□ -0.13
CCDC107Q8WV48 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC107Q8WV48 MIR1224-201ENST00000408193 85 ntBASIC14.27□□□□□ -0.13
CCDC107Q8WV48 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CCDC107Q8WV48 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC107Q8WV48 AC132008.2-207ENST00000454517 770 ntBASIC14.27□□□□□ -0.13
CCDC107Q8WV48 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.27□□□□□ -0.13
CCDC107Q8WV48 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.27□□□□□ -0.13
CCDC107Q8WV48 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC107Q8WV48 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms