Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CT55Q8WUE5 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CT55Q8WUE5 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.19■□□□□ 0.02
CT55Q8WUE5 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CT55Q8WUE5 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CT55Q8WUE5 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.19■□□□□ 0.02
CT55Q8WUE5 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CT55Q8WUE5 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CT55Q8WUE5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.19■□□□□ 0.02
CT55Q8WUE5 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CT55Q8WUE5 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.19■□□□□ 0.02
CT55Q8WUE5 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CT55Q8WUE5 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CT55Q8WUE5 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CT55Q8WUE5 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CT55Q8WUE5 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.19■□□□□ 0.02
CT55Q8WUE5 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.19■□□□□ 0.02
CT55Q8WUE5 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.19■□□□□ 0.02
CT55Q8WUE5 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.19■□□□□ 0.02
CT55Q8WUE5 INE1-201ENST00000456273 945 ntBASIC15.19■□□□□ 0.02
CT55Q8WUE5 RN7SL752P-201ENST00000463779 287 ntBASIC15.19■□□□□ 0.02
CT55Q8WUE5 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CT55Q8WUE5 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CT55Q8WUE5 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CT55Q8WUE5 AC055876.2-201ENST00000531834 546 ntBASIC15.19■□□□□ 0.02
CT55Q8WUE5 TPRX2P-201ENST00000535362 881 ntBASIC15.19■□□□□ 0.02
CT55Q8WUE5 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CT55Q8WUE5 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.19■□□□□ 0.02
CT55Q8WUE5 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.19■□□□□ 0.02
CT55Q8WUE5 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.19■□□□□ 0.02
CT55Q8WUE5 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.19■□□□□ 0.02
CT55Q8WUE5 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CT55Q8WUE5 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.19■□□□□ 0.02
CT55Q8WUE5 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CT55Q8WUE5 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CT55Q8WUE5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CT55Q8WUE5 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CT55Q8WUE5 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CT55Q8WUE5 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CT55Q8WUE5 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CT55Q8WUE5 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.19■□□□□ 0.02
CT55Q8WUE5 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.19■□□□□ 0.02
CT55Q8WUE5 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CT55Q8WUE5 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CT55Q8WUE5 OR6D1P-203ENST00000641209 4860 ntBASIC15.18■□□□□ 0.02
CT55Q8WUE5 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CT55Q8WUE5 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CT55Q8WUE5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CT55Q8WUE5 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.18■□□□□ 0.02
CT55Q8WUE5 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CT55Q8WUE5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CT55Q8WUE5 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CT55Q8WUE5 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.18■□□□□ 0.02
CT55Q8WUE5 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.18■□□□□ 0.02
CT55Q8WUE5 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CT55Q8WUE5 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.18■□□□□ 0.02
CT55Q8WUE5 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.18■□□□□ 0.02
CT55Q8WUE5 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.18■□□□□ 0.02
CT55Q8WUE5 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CT55Q8WUE5 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CT55Q8WUE5 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.18■□□□□ 0.02
CT55Q8WUE5 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CT55Q8WUE5 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.18■□□□□ 0.02
CT55Q8WUE5 U91328.1-201ENST00000437528 223 ntBASIC15.18■□□□□ 0.02
CT55Q8WUE5 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.18■□□□□ 0.02
CT55Q8WUE5 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.18■□□□□ 0.02
CT55Q8WUE5 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.18■□□□□ 0.02
CT55Q8WUE5 AL589987.1-201ENST00000453380 819 ntBASIC15.18■□□□□ 0.02
CT55Q8WUE5 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.18■□□□□ 0.02
CT55Q8WUE5 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CT55Q8WUE5 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.18■□□□□ 0.02
CT55Q8WUE5 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.18■□□□□ 0.02
CT55Q8WUE5 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.18■□□□□ 0.02
CT55Q8WUE5 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CT55Q8WUE5 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.18■□□□□ 0.02
CT55Q8WUE5 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.18■□□□□ 0.02
CT55Q8WUE5 AL365330.1-201ENST00000607459 531 ntBASIC15.18■□□□□ 0.02
CT55Q8WUE5 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CT55Q8WUE5 IGHV3-72-202ENST00000621503 303 ntBASIC15.18■□□□□ 0.02
CT55Q8WUE5 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CT55Q8WUE5 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CT55Q8WUE5 AC105020.1-201ENST00000435356 2205 ntBASIC15.18■□□□□ 0.02
CT55Q8WUE5 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CT55Q8WUE5 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CT55Q8WUE5 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CT55Q8WUE5 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CT55Q8WUE5 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CT55Q8WUE5 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CT55Q8WUE5 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CT55Q8WUE5 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CT55Q8WUE5 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CT55Q8WUE5 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CT55Q8WUE5 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.17■□□□□ 0.02
CT55Q8WUE5 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CT55Q8WUE5 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.17■□□□□ 0.02
CT55Q8WUE5 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CT55Q8WUE5 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.17■□□□□ 0.02
CT55Q8WUE5 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CT55Q8WUE5 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.17■□□□□ 0.02
CT55Q8WUE5 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms