Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHKBP1Q8TBC3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHKBP1Q8TBC3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHKBP1Q8TBC3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHKBP1Q8TBC3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SHKBP1Q8TBC3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHKBP1Q8TBC3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHKBP1Q8TBC3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHKBP1Q8TBC3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHKBP1Q8TBC3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHKBP1Q8TBC3 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHKBP1Q8TBC3 AC005034.1-201ENST00000426657 489 ntBASIC17.21■□□□□ 0.35
SHKBP1Q8TBC3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.21■□□□□ 0.35
SHKBP1Q8TBC3 AC098859.1-201ENST00000502915 1238 ntBASIC17.21■□□□□ 0.35
SHKBP1Q8TBC3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.21■□□□□ 0.35
SHKBP1Q8TBC3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.21■□□□□ 0.35
SHKBP1Q8TBC3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHKBP1Q8TBC3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.21■□□□□ 0.35
SHKBP1Q8TBC3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.21■□□□□ 0.35
SHKBP1Q8TBC3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHKBP1Q8TBC3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHKBP1Q8TBC3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SHKBP1Q8TBC3 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.21■□□□□ 0.35
SHKBP1Q8TBC3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SHKBP1Q8TBC3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SHKBP1Q8TBC3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.21■□□□□ 0.34
SHKBP1Q8TBC3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
SHKBP1Q8TBC3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 AC022144.1-201ENST00000602255 1580 ntBASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 AL353705.2-201ENST00000428243 662 ntBASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 AC005225.4-201ENST00000557330 545 ntBASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHKBP1Q8TBC3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 AL035456.1-201ENST00000456064 1369 ntBASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 CRB3P1-201ENST00000449338 276 ntBASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 BANF1P1-201ENST00000553684 263 ntBASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms