Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH19Q8TAB3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH19Q8TAB3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH19Q8TAB3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCDH19Q8TAB3 AC022188.1-201ENST00000620960 1664 ntBASIC16.94■□□□□ 0.3
PCDH19Q8TAB3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCDH19Q8TAB3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDH19Q8TAB3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
PCDH19Q8TAB3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 AC112191.1-201ENST00000523689 701 ntBASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 AC134684.3-201ENST00000641758 218 ntBASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH19Q8TAB3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms