Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 FAM58CP-201ENST00000435741 640 ntBASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 AC091812.2-201ENST00000619081 385 ntBASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 AC016027.1-202ENST00000607927 1699 ntBASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 AL671277.1-201ENST00000429656 993 ntBASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 RN7SL589P-201ENST00000481268 310 ntBASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 AC005622.1-201ENST00000636801 1703 ntBASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRFBP1Q8NEF9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 CYP2T1P-202ENST00000641596 2535 ntBASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 MTHFR-217ENST00000641820 1569 ntBASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 AL671883.3-201ENST00000603274 991 ntBASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 AC099522.2-201ENST00000607001 744 ntBASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms