Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
C3orf56Q8N813 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
C3orf56Q8N813 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
C3orf56Q8N813 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
C3orf56Q8N813 LYSMD4-203ENST00000378904 2122 ntBASIC12.83□□□□□ -0.35
C3orf56Q8N813 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
C3orf56Q8N813 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
C3orf56Q8N813 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
C3orf56Q8N813 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
C3orf56Q8N813 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
C3orf56Q8N813 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
C3orf56Q8N813 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C3orf56Q8N813 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
C3orf56Q8N813 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.83□□□□□ -0.36
C3orf56Q8N813 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
C3orf56Q8N813 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
C3orf56Q8N813 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C3orf56Q8N813 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
C3orf56Q8N813 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
C3orf56Q8N813 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.83□□□□□ -0.36
C3orf56Q8N813 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.83□□□□□ -0.36
C3orf56Q8N813 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.83□□□□□ -0.36
C3orf56Q8N813 TMEM14DP-201ENST00000422205 345 ntBASIC12.83□□□□□ -0.36
C3orf56Q8N813 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
C3orf56Q8N813 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.83□□□□□ -0.36
C3orf56Q8N813 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.83□□□□□ -0.36
C3orf56Q8N813 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C3orf56Q8N813 ELK1P1-201ENST00000485699 580 ntBASIC12.83□□□□□ -0.36
C3orf56Q8N813 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
C3orf56Q8N813 AC119751.2-201ENST00000504529 210 ntBASIC12.83□□□□□ -0.36
C3orf56Q8N813 AC104596.2-201ENST00000512793 793 ntBASIC12.83□□□□□ -0.36
C3orf56Q8N813 SDHAP3-202ENST00000515467 728 ntBASIC12.83□□□□□ -0.36
C3orf56Q8N813 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.83□□□□□ -0.36
C3orf56Q8N813 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.83□□□□□ -0.36
C3orf56Q8N813 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
C3orf56Q8N813 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.83□□□□□ -0.36
C3orf56Q8N813 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.83□□□□□ -0.36
C3orf56Q8N813 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C3orf56Q8N813 MIR4492-201ENST00000581627 80 ntBASIC12.83□□□□□ -0.36
C3orf56Q8N813 AC103810.3-201ENST00000583567 96 ntBASIC12.83□□□□□ -0.36
C3orf56Q8N813 CTBP2P3-201ENST00000585629 1255 ntBASIC12.83□□□□□ -0.36
C3orf56Q8N813 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.83□□□□□ -0.36
C3orf56Q8N813 AC093726.1-201ENST00000608064 963 ntBASIC12.83□□□□□ -0.36
C3orf56Q8N813 AL133215.2-201ENST00000609242 977 ntBASIC12.83□□□□□ -0.36
C3orf56Q8N813 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.83□□□□□ -0.36
C3orf56Q8N813 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C3orf56Q8N813 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C3orf56Q8N813 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C3orf56Q8N813 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
C3orf56Q8N813 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC12.83□□□□□ -0.36
C3orf56Q8N813 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C3orf56Q8N813 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
C3orf56Q8N813 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C3orf56Q8N813 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
C3orf56Q8N813 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC12.83□□□□□ -0.36
C3orf56Q8N813 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
C3orf56Q8N813 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C3orf56Q8N813 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C3orf56Q8N813 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.83□□□□□ -0.36
C3orf56Q8N813 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C3orf56Q8N813 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC12.83□□□□□ -0.36
C3orf56Q8N813 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C3orf56Q8N813 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC12.82□□□□□ -0.36
C3orf56Q8N813 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
C3orf56Q8N813 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
C3orf56Q8N813 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C3orf56Q8N813 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
C3orf56Q8N813 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
C3orf56Q8N813 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC12.82□□□□□ -0.36
C3orf56Q8N813 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
C3orf56Q8N813 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.82□□□□□ -0.36
C3orf56Q8N813 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
C3orf56Q8N813 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C3orf56Q8N813 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
C3orf56Q8N813 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
C3orf56Q8N813 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
C3orf56Q8N813 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
C3orf56Q8N813 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.82□□□□□ -0.36
C3orf56Q8N813 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
C3orf56Q8N813 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC12.82□□□□□ -0.36
C3orf56Q8N813 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.82□□□□□ -0.36
C3orf56Q8N813 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
C3orf56Q8N813 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
C3orf56Q8N813 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.82□□□□□ -0.36
C3orf56Q8N813 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.82□□□□□ -0.36
C3orf56Q8N813 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
C3orf56Q8N813 AC114501.2-201ENST00000439631 535 ntBASIC12.82□□□□□ -0.36
C3orf56Q8N813 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.82□□□□□ -0.36
C3orf56Q8N813 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC12.82□□□□□ -0.36
C3orf56Q8N813 RETN-203ENST00000629642 400 ntTSL 5 BASIC12.82□□□□□ -0.36
C3orf56Q8N813 AL033527.5-201ENST00000641382 801 ntBASIC12.82□□□□□ -0.36
C3orf56Q8N813 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC12.82□□□□□ -0.36
C3orf56Q8N813 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
C3orf56Q8N813 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC12.82□□□□□ -0.36
C3orf56Q8N813 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
C3orf56Q8N813 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C3orf56Q8N813 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
C3orf56Q8N813 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC12.82□□□□□ -0.36
C3orf56Q8N813 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C3orf56Q8N813 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms