Protein–RNA interactions for Protein: Q8N5V2

NGEF, Ephexin-1, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGEFQ8N5V2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
NGEFQ8N5V2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NGEFQ8N5V2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NGEFQ8N5V2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC21.53■■□□□ 1.04
NGEFQ8N5V2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC21.53■■□□□ 1.04
NGEFQ8N5V2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC21.53■■□□□ 1.04
NGEFQ8N5V2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC21.53■■□□□ 1.04
NGEFQ8N5V2 AC069335.1-201ENST00000489972 472 ntBASIC21.53■■□□□ 1.04
NGEFQ8N5V2 AC098859.1-201ENST00000502915 1238 ntBASIC21.53■■□□□ 1.04
NGEFQ8N5V2 Z92544.3-201ENST00000624747 417 ntBASIC21.53■■□□□ 1.04
NGEFQ8N5V2 AC084121.4-201ENST00000641598 221 ntBASIC21.53■■□□□ 1.04
NGEFQ8N5V2 AF228730.8-201ENST00000642140 221 ntBASIC21.53■■□□□ 1.04
NGEFQ8N5V2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NGEFQ8N5V2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC21.53■■□□□ 1.04
NGEFQ8N5V2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NGEFQ8N5V2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NGEFQ8N5V2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NGEFQ8N5V2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NGEFQ8N5V2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 FAM8A3P-201ENST00000427218 844 ntBASIC21.52■■□□□ 1.04
NGEFQ8N5V2 SPCS2P4-201ENST00000436160 681 ntBASIC21.52■■□□□ 1.04
NGEFQ8N5V2 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 DUX4L27-201ENST00000554796 1261 ntBASIC21.52■■□□□ 1.04
NGEFQ8N5V2 MIR4321-201ENST00000592276 80 ntBASIC21.52■■□□□ 1.04
NGEFQ8N5V2 AC092364.2-202ENST00000597012 1073 ntBASIC21.52■■□□□ 1.04
NGEFQ8N5V2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NGEFQ8N5V2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.03
NGEFQ8N5V2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC21.52■■□□□ 1.03
NGEFQ8N5V2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC21.52■■□□□ 1.03
NGEFQ8N5V2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC21.52■■□□□ 1.03
NGEFQ8N5V2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC21.51■■□□□ 1.03
NGEFQ8N5V2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC21.51■■□□□ 1.03
NGEFQ8N5V2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC21.51■■□□□ 1.03
NGEFQ8N5V2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
NGEFQ8N5V2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NGEFQ8N5V2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NGEFQ8N5V2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
NGEFQ8N5V2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NGEFQ8N5V2 AL662844.4-201ENST00000606367 2838 ntBASIC21.51■■□□□ 1.03
NGEFQ8N5V2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
NGEFQ8N5V2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NGEFQ8N5V2 KRT18P32-201ENST00000424695 1287 ntBASIC21.51■■□□□ 1.03
NGEFQ8N5V2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
NGEFQ8N5V2 KRT8P23-201ENST00000560090 1207 ntBASIC21.51■■□□□ 1.03
NGEFQ8N5V2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NGEFQ8N5V2 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NGEFQ8N5V2 AC011467.4-201ENST00000594891 528 ntBASIC21.51■■□□□ 1.03
NGEFQ8N5V2 AC009093.7-201ENST00000623853 1223 ntBASIC21.51■■□□□ 1.03
NGEFQ8N5V2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NGEFQ8N5V2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
NGEFQ8N5V2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
NGEFQ8N5V2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NGEFQ8N5V2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NGEFQ8N5V2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
NGEFQ8N5V2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NGEFQ8N5V2 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC21.51■■□□□ 1.03
NGEFQ8N5V2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NGEFQ8N5V2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
NGEFQ8N5V2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC21.5■■□□□ 1.03
NGEFQ8N5V2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
NGEFQ8N5V2 UXT-AS1-201ENST00000590504 1525 ntBASIC21.5■■□□□ 1.03
NGEFQ8N5V2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
NGEFQ8N5V2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
NGEFQ8N5V2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC21.5■■□□□ 1.03
NGEFQ8N5V2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NGEFQ8N5V2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC21.5■■□□□ 1.03
NGEFQ8N5V2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NGEFQ8N5V2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NGEFQ8N5V2 AC005498.2-205ENST00000593218 784 ntBASIC21.5■■□□□ 1.03
NGEFQ8N5V2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NGEFQ8N5V2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC21.5■■□□□ 1.03
NGEFQ8N5V2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC21.5■■□□□ 1.03
NGEFQ8N5V2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NGEFQ8N5V2 AL603832.2-201ENST00000566195 2125 ntBASIC21.5■■□□□ 1.03
NGEFQ8N5V2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC21.5■■□□□ 1.03
NGEFQ8N5V2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms