Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 TTTY23B-201ENST00000442790 549 ntBASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 KRT8P12-202ENST00000472924 1397 ntBASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 LTB4R2-202ENST00000528054 3092 ntBASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 AC093724.1-201ENST00000448659 1027 ntBASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 SDHAP3-202ENST00000515467 728 ntBASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 AC023310.3-201ENST00000557027 670 ntBASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 AC100756.1-201ENST00000562736 682 ntBASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 AC138749.3-201ENST00000567691 622 ntBASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 AC026979.3-201ENST00000607315 403 ntBASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 AC116165.1-201ENST00000611806 668 ntBASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 AL109936.8-201ENST00000641772 604 ntBASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 AL589702.1-201ENST00000641229 1509 ntBASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEFF1Q8IYR6 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 AP001094.4-201ENST00000579008 2176 ntBASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 AL589987.1-201ENST00000453380 819 ntBASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms