Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 AC092171.3-201ENST00000610122 2651 ntBASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 AL353705.2-201ENST00000428243 662 ntBASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 BASP1P1-201ENST00000430708 665 ntBASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 BCRP1-201ENST00000444246 691 ntBASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.28■□□□□ 0.36
SCN4BQ8IWT1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 AC005622.1-201ENST00000636801 1703 ntBASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 AL589702.1-201ENST00000641229 1509 ntBASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 FAM8A3P-201ENST00000427218 844 ntBASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 MTND6P24-201ENST00000440466 518 ntBASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 AC097493.3-201ENST00000509725 367 ntBASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 RNA5SP421-201ENST00000516864 134 ntBASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 AL096865.1-201ENST00000606796 927 ntBASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 AC007967.4-201ENST00000614700 386 ntBASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCN4BQ8IWT1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCN4BQ8IWT1 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
SCN4BQ8IWT1 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCN4BQ8IWT1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCN4BQ8IWT1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.27■□□□□ 0.35
SCN4BQ8IWT1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SCN4BQ8IWT1 LTB4R2-202ENST00000528054 3092 ntBASIC17.27■□□□□ 0.35
SCN4BQ8IWT1 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 FLJ38576-201ENST00000623820 2459 ntBASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 INGX-202ENST00000489074 768 ntBASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms