Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAB11FIP4Q86YS3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAB11FIP4Q86YS3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
RAB11FIP4Q86YS3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.27■□□□□ 0.67
RAB11FIP4Q86YS3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.27■□□□□ 0.67
RAB11FIP4Q86YS3 AC073439.1-201ENST00000624121 1774 ntBASIC19.27■□□□□ 0.67
RAB11FIP4Q86YS3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 ELL2P1-201ENST00000413990 1906 ntBASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 AC243562.1-201ENST00000560672 389 ntBASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 AC020765.3-201ENST00000613051 740 ntBASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RAB11FIP4Q86YS3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 PCDHA1-201ENST00000378133 2726 ntBASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 HYMAI-201ENST00000635591 3347 ntBASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 KRT18P13-201ENST00000400056 1290 ntBASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 DNAJB3-201ENST00000446806 729 ntBASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 AL161645.1-201ENST00000622716 1255 ntBASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 LINC01144-201ENST00000626198 1710 ntBASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB11FIP4Q86YS3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 AC079140.1-201ENST00000508039 487 ntBASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms