Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 AC009477.1-201ENST00000452936 217 ntBASIC18.25■□□□□ 0.51
TRIM50Q86XT4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 AC009407.1-201ENST00000568958 598 ntBASIC18.25■□□□□ 0.51
TRIM50Q86XT4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 AL079307.3-201ENST00000556114 283 ntBASIC18.24■□□□□ 0.51
TRIM50Q86XT4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 AC239800.4-201ENST00000603712 296 ntBASIC18.24■□□□□ 0.51
TRIM50Q86XT4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 PCGF3-213ENST00000620529 1899 ntBASIC18.24■□□□□ 0.51
TRIM50Q86XT4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM50Q86XT4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 HLA-A-202ENST00000376806 1854 ntBASIC18.23■□□□□ 0.51
TRIM50Q86XT4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 HLA-J-202ENST00000469281 1241 ntBASIC18.23■□□□□ 0.51
TRIM50Q86XT4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 AC061975.2-201ENST00000581722 295 ntBASIC18.23■□□□□ 0.51
TRIM50Q86XT4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRIM50Q86XT4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms