Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRTM1Q86UE6 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM1Q86UE6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
LRRTM1Q86UE6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM1Q86UE6 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM1Q86UE6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRTM1Q86UE6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM1Q86UE6 TNRC18P2-201ENST00000417666 2714 ntBASIC14.31□□□□□ -0.12
LRRTM1Q86UE6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM1Q86UE6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRTM1Q86UE6 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM1Q86UE6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.31□□□□□ -0.12
LRRTM1Q86UE6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM1Q86UE6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LRRTM1Q86UE6 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM1Q86UE6 AL592424.1-201ENST00000563624 1536 ntBASIC14.31□□□□□ -0.12
LRRTM1Q86UE6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.31□□□□□ -0.12
LRRTM1Q86UE6 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 AC012615.1-201ENST00000565797 1299 ntBASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 AC020765.3-201ENST00000613051 740 ntBASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 AL353732.1-201ENST00000569618 1459 ntBASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 AC099063.4-201ENST00000641099 1602 ntBASIC14.3□□□□□ -0.12
LRRTM1Q86UE6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 PTCHD3P3-201ENST00000403073 906 ntBASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 AC132008.2-207ENST00000454517 770 ntBASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 AC106795.1-205ENST00000512851 1056 ntBASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 AC107918.2-201ENST00000530817 355 ntBASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM1Q86UE6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms