Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 AC007191.1-201ENST00000623179 2995 ntBASIC13.71□□□□□ -0.21
ZNF546Q86UE3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.71□□□□□ -0.21
ZNF546Q86UE3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
ZNF546Q86UE3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
ZNF546Q86UE3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.71□□□□□ -0.22
ZNF546Q86UE3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
ZNF546Q86UE3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.71□□□□□ -0.22
ZNF546Q86UE3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.71□□□□□ -0.22
ZNF546Q86UE3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
ZNF546Q86UE3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
ZNF546Q86UE3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ZNF546Q86UE3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.22
ZNF546Q86UE3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 CICP23-201ENST00000605013 2741 ntBASIC13.7□□□□□ -0.22
ZNF546Q86UE3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 KRT17P2-201ENST00000300992 1314 ntBASIC13.7□□□□□ -0.22
ZNF546Q86UE3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 INGX-201ENST00000359239 846 ntBASIC13.7□□□□□ -0.22
ZNF546Q86UE3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.7□□□□□ -0.22
ZNF546Q86UE3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.7□□□□□ -0.22
ZNF546Q86UE3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF546Q86UE3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 ECEL1P3-201ENST00000427961 737 ntBASIC13.69□□□□□ -0.22
ZNF546Q86UE3 KRT18P48-201ENST00000434763 852 ntBASIC13.69□□□□□ -0.22
ZNF546Q86UE3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.69□□□□□ -0.22
ZNF546Q86UE3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms