Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 DBET-201ENST00000630918 3363 ntBASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 ZNF259P1-201ENST00000407656 1365 ntBASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 AC140658.5-201ENST00000438532 169 ntBASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 AC109635.5-201ENST00000533593 962 ntBASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 AC140113.2-201ENST00000604370 208 ntBASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 AL031055.1-201ENST00000606362 631 ntBASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 FAM197Y3-203ENST00000618346 717 ntBASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 AC092865.6-201ENST00000642101 219 ntBASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NHLRC1Q6VVB1 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 LINC01144-201ENST00000626198 1710 ntBASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 BCAR1-209ENST00000546196 1340 ntBASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 AL009183.1-201ENST00000603760 355 ntBASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 AC021097.1-201ENST00000607902 574 ntBASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 AC027601.4-201ENST00000611259 610 ntBASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 AL513190.1-201ENST00000621254 727 ntBASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NHLRC1Q6VVB1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NHLRC1Q6VVB1 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
NHLRC1Q6VVB1 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NHLRC1Q6VVB1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
NHLRC1Q6VVB1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NHLRC1Q6VVB1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NHLRC1Q6VVB1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.77□□□□□ -0.04
NHLRC1Q6VVB1 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NHLRC1Q6VVB1 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NHLRC1Q6VVB1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
NHLRC1Q6VVB1 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
NHLRC1Q6VVB1 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NHLRC1Q6VVB1 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms