Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 NKAPP1-205ENST00000585790 367 ntBASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 AL022326.1-202ENST00000641533 845 ntBASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 AC005089.1-201ENST00000619486 2241 ntBASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 AL135999.2-201ENST00000622438 1686 ntBASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 AKR1C7P-201ENST00000305623 895 ntBASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 PRYP5-201ENST00000451909 266 ntBASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 UNC93B7-201ENST00000509439 705 ntBASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
TMEM53Q6P2H8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.14■□□□□ 0.01
TMEM53Q6P2H8 AF238378.1-201ENST00000526806 358 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms