Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPIN4Q56A73 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.7■□□□□ 0.1
SPIN4Q56A73 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SPIN4Q56A73 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
SPIN4Q56A73 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.7■□□□□ 0.1
SPIN4Q56A73 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SPIN4Q56A73 AC007950.2-201ENST00000615045 2347 ntBASIC15.69■□□□□ 0.1
SPIN4Q56A73 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPIN4Q56A73 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.69■□□□□ 0.1
SPIN4Q56A73 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
SPIN4Q56A73 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SPIN4Q56A73 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SPIN4Q56A73 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPIN4Q56A73 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SPIN4Q56A73 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.69■□□□□ 0.1
SPIN4Q56A73 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.69■□□□□ 0.1
SPIN4Q56A73 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.69■□□□□ 0.1
SPIN4Q56A73 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPIN4Q56A73 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPIN4Q56A73 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPIN4Q56A73 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SPIN4Q56A73 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPIN4Q56A73 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.69■□□□□ 0.1
SPIN4Q56A73 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPIN4Q56A73 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPIN4Q56A73 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPIN4Q56A73 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.69■□□□□ 0.1
SPIN4Q56A73 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.69■□□□□ 0.1
SPIN4Q56A73 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.69■□□□□ 0.1
SPIN4Q56A73 AC034105.1-201ENST00000563488 319 ntBASIC15.69■□□□□ 0.1
SPIN4Q56A73 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.69■□□□□ 0.1
SPIN4Q56A73 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.69■□□□□ 0.1
SPIN4Q56A73 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.69■□□□□ 0.1
SPIN4Q56A73 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPIN4Q56A73 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.69■□□□□ 0.1
SPIN4Q56A73 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.69■□□□□ 0.1
SPIN4Q56A73 AC064836.3-201ENST00000607928 673 ntBASIC15.69■□□□□ 0.1
SPIN4Q56A73 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SPIN4Q56A73 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.69■□□□□ 0.1
SPIN4Q56A73 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPIN4Q56A73 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPIN4Q56A73 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPIN4Q56A73 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.69■□□□□ 0.1
SPIN4Q56A73 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPIN4Q56A73 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SPIN4Q56A73 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SPIN4Q56A73 BCAR1-209ENST00000546196 1340 ntBASIC15.68■□□□□ 0.1
SPIN4Q56A73 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPIN4Q56A73 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SPIN4Q56A73 AC092919.2-201ENST00000623631 1645 ntBASIC15.68■□□□□ 0.1
SPIN4Q56A73 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPIN4Q56A73 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPIN4Q56A73 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SPIN4Q56A73 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPIN4Q56A73 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.68■□□□□ 0.1
SPIN4Q56A73 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.68■□□□□ 0.1
SPIN4Q56A73 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SPIN4Q56A73 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.68■□□□□ 0.1
SPIN4Q56A73 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPIN4Q56A73 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPIN4Q56A73 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.68■□□□□ 0.1
SPIN4Q56A73 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPIN4Q56A73 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.68■□□□□ 0.1
SPIN4Q56A73 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPIN4Q56A73 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPIN4Q56A73 AC092474.2-201ENST00000424288 719 ntBASIC15.68■□□□□ 0.1
SPIN4Q56A73 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SPIN4Q56A73 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.68■□□□□ 0.1
SPIN4Q56A73 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.68■□□□□ 0.1
SPIN4Q56A73 AL078644.1-201ENST00000609881 752 ntBASIC15.68■□□□□ 0.1
SPIN4Q56A73 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.68■□□□□ 0.1
SPIN4Q56A73 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPIN4Q56A73 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SPIN4Q56A73 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPIN4Q56A73 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPIN4Q56A73 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPIN4Q56A73 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPIN4Q56A73 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.68■□□□□ 0.1
SPIN4Q56A73 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPIN4Q56A73 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.68■□□□□ 0.1
SPIN4Q56A73 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SPIN4Q56A73 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPIN4Q56A73 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.68■□□□□ 0.1
SPIN4Q56A73 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.68■□□□□ 0.1
SPIN4Q56A73 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPIN4Q56A73 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.68■□□□□ 0.1
SPIN4Q56A73 AC025580.3-201ENST00000617932 1424 ntBASIC15.68■□□□□ 0.1
SPIN4Q56A73 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPIN4Q56A73 AC008741.2-201ENST00000612792 3115 ntBASIC15.68■□□□□ 0.1
SPIN4Q56A73 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.68■□□□□ 0.1
SPIN4Q56A73 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.68■□□□□ 0.1
SPIN4Q56A73 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SPIN4Q56A73 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPIN4Q56A73 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPIN4Q56A73 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPIN4Q56A73 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
SPIN4Q56A73 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPIN4Q56A73 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SPIN4Q56A73 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.67■□□□□ 0.1
SPIN4Q56A73 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms