Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.87■□□□□ 0.29
ALFQ53S48 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.87■□□□□ 0.29
ALFQ53S48 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALFQ53S48 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ALFQ53S48 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALFQ53S48 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.87■□□□□ 0.29
ALFQ53S48 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALFQ53S48 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ALFQ53S48 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALFQ53S48 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALFQ53S48 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
ALFQ53S48 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALFQ53S48 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALFQ53S48 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ALFQ53S48 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALFQ53S48 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALFQ53S48 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
ALFQ53S48 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALFQ53S48 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.86■□□□□ 0.29
ALFQ53S48 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.86■□□□□ 0.29
ALFQ53S48 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ALFQ53S48 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ALFQ53S48 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ALFQ53S48 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALFQ53S48 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALFQ53S48 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ALFQ53S48 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.86■□□□□ 0.29
ALFQ53S48 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALFQ53S48 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.86■□□□□ 0.29
ALFQ53S48 SPDYE14P-201ENST00000442619 822 ntBASIC16.86■□□□□ 0.29
ALFQ53S48 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.86■□□□□ 0.29
ALFQ53S48 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ALFQ53S48 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.86■□□□□ 0.29
ALFQ53S48 SPTSSB-204ENST00000617024 1292 ntBASIC16.86■□□□□ 0.29
ALFQ53S48 AC093028.1-201ENST00000622998 982 ntBASIC16.86■□□□□ 0.29
ALFQ53S48 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.86■□□□□ 0.29
ALFQ53S48 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.86■□□□□ 0.29
ALFQ53S48 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALFQ53S48 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ALFQ53S48 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
ALFQ53S48 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ALFQ53S48 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALFQ53S48 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.86■□□□□ 0.29
ALFQ53S48 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALFQ53S48 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALFQ53S48 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.86■□□□□ 0.29
ALFQ53S48 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ALFQ53S48 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.86■□□□□ 0.29
ALFQ53S48 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALFQ53S48 AL589702.1-201ENST00000641229 1509 ntBASIC16.86■□□□□ 0.29
ALFQ53S48 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALFQ53S48 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ALFQ53S48 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.85■□□□□ 0.29
ALFQ53S48 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.85■□□□□ 0.29
ALFQ53S48 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ALFQ53S48 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.85■□□□□ 0.29
ALFQ53S48 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.85■□□□□ 0.29
ALFQ53S48 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.85■□□□□ 0.29
ALFQ53S48 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALFQ53S48 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALFQ53S48 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
ALFQ53S48 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ALFQ53S48 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALFQ53S48 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.85■□□□□ 0.29
ALFQ53S48 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.85■□□□□ 0.29
ALFQ53S48 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.85■□□□□ 0.29
ALFQ53S48 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.85■□□□□ 0.29
ALFQ53S48 ALG1L8P-201ENST00000533887 760 ntBASIC16.85■□□□□ 0.29
ALFQ53S48 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.85■□□□□ 0.29
ALFQ53S48 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.85■□□□□ 0.29
ALFQ53S48 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.85■□□□□ 0.29
ALFQ53S48 AC026150.2-201ENST00000564693 1156 ntBASIC16.85■□□□□ 0.29
ALFQ53S48 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
ALFQ53S48 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALFQ53S48 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALFQ53S48 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.85■□□□□ 0.29
ALFQ53S48 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALFQ53S48 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALFQ53S48 PCDH8P1-201ENST00000428983 2773 ntBASIC16.85■□□□□ 0.29
ALFQ53S48 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.85■□□□□ 0.29
ALFQ53S48 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ALFQ53S48 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALFQ53S48 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.85■□□□□ 0.29
ALFQ53S48 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
ALFQ53S48 AP3S2-216ENST00000617003 1561 ntBASIC16.85■□□□□ 0.29
ALFQ53S48 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALFQ53S48 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
ALFQ53S48 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
ALFQ53S48 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ALFQ53S48 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALFQ53S48 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.84■□□□□ 0.29
ALFQ53S48 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.84■□□□□ 0.29
ALFQ53S48 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ALFQ53S48 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.84■□□□□ 0.29
ALFQ53S48 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ALFQ53S48 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.84■□□□□ 0.29
ALFQ53S48 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.84■□□□□ 0.29
ALFQ53S48 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.84■□□□□ 0.29
ALFQ53S48 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ALFQ53S48 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms