Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHROOM1Q2M3G4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19■□□□□ 0.63
SHROOM1Q2M3G4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SHROOM1Q2M3G4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19■□□□□ 0.63
SHROOM1Q2M3G4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHROOM1Q2M3G4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHROOM1Q2M3G4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
SHROOM1Q2M3G4 INE1-201ENST00000456273 945 ntBASIC19■□□□□ 0.63
SHROOM1Q2M3G4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHROOM1Q2M3G4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHROOM1Q2M3G4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19■□□□□ 0.63
SHROOM1Q2M3G4 AC132938.2-201ENST00000579188 680 ntBASIC19■□□□□ 0.63
SHROOM1Q2M3G4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
SHROOM1Q2M3G4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SHROOM1Q2M3G4 AL591163.1-201ENST00000641757 987 ntBASIC19■□□□□ 0.63
SHROOM1Q2M3G4 CYP4F24P-201ENST00000586049 1580 ntBASIC19■□□□□ 0.63
SHROOM1Q2M3G4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19■□□□□ 0.63
SHROOM1Q2M3G4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19■□□□□ 0.63
SHROOM1Q2M3G4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHROOM1Q2M3G4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHROOM1Q2M3G4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHROOM1Q2M3G4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHROOM1Q2M3G4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SHROOM1Q2M3G4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHROOM1Q2M3G4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 OR8S1-201ENST00000310194 1080 ntBASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 DFFBP1-201ENST00000433250 979 ntBASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 AC007431.3-201ENST00000623221 587 ntBASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 AL358472.5-202ENST00000641448 1267 ntBASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHROOM1Q2M3G4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 AL139010.1-201ENST00000454878 894 ntBASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 AL008721.1-201ENST00000609964 604 ntBASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM1Q2M3G4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms