Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM11AP58511 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.19■□□□□ 0.02
SMIM11AP58511 AL596257.1-201ENST00000641463 2694 ntBASIC15.19■□□□□ 0.02
SMIM11AP58511 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM11AP58511 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM11AP58511 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM11AP58511 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM11AP58511 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM11AP58511 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM11AP58511 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM11AP58511 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.18■□□□□ 0.02
SMIM11AP58511 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM11AP58511 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM11AP58511 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM11AP58511 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM11AP58511 AC022532.1-201ENST00000624563 1728 ntBASIC15.18■□□□□ 0.02
SMIM11AP58511 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM11AP58511 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.18■□□□□ 0.02
SMIM11AP58511 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.18■□□□□ 0.02
SMIM11AP58511 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.18■□□□□ 0.02
SMIM11AP58511 AC092384.3-202ENST00000564646 2873 ntBASIC15.18■□□□□ 0.02
SMIM11AP58511 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.18■□□□□ 0.02
SMIM11AP58511 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM11AP58511 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM11AP58511 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SMIM11AP58511 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.18■□□□□ 0.02
SMIM11AP58511 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM11AP58511 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM11AP58511 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.18■□□□□ 0.02
SMIM11AP58511 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.18■□□□□ 0.02
SMIM11AP58511 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.18■□□□□ 0.02
SMIM11AP58511 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.18■□□□□ 0.02
SMIM11AP58511 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM11AP58511 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.18■□□□□ 0.02
SMIM11AP58511 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.18■□□□□ 0.02
SMIM11AP58511 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.18■□□□□ 0.02
SMIM11AP58511 PGM5P2-202ENST00000637225 1043 ntBASIC15.18■□□□□ 0.02
SMIM11AP58511 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM11AP58511 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.18■□□□□ 0.02
SMIM11AP58511 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM11AP58511 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.18■□□□□ 0.02
SMIM11AP58511 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.18■□□□□ 0.02
SMIM11AP58511 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM11AP58511 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.18■□□□□ 0.02
SMIM11AP58511 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM11AP58511 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM11AP58511 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.18■□□□□ 0.02
SMIM11AP58511 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.17■□□□□ 0.02
SMIM11AP58511 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM11AP58511 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM11AP58511 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM11AP58511 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.17■□□□□ 0.02
SMIM11AP58511 AC069224.1-201ENST00000566372 1715 ntBASIC15.17■□□□□ 0.02
SMIM11AP58511 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SMIM11AP58511 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM11AP58511 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM11AP58511 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.17■□□□□ 0.02
SMIM11AP58511 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM11AP58511 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SMIM11AP58511 AC011270.2-201ENST00000624293 2550 ntBASIC15.17■□□□□ 0.02
SMIM11AP58511 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.17■□□□□ 0.02
SMIM11AP58511 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM11AP58511 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.17■□□□□ 0.02
SMIM11AP58511 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM11AP58511 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.17■□□□□ 0.02
SMIM11AP58511 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.17■□□□□ 0.02
SMIM11AP58511 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.17■□□□□ 0.02
SMIM11AP58511 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.17■□□□□ 0.02
SMIM11AP58511 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM11AP58511 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.17■□□□□ 0.02
SMIM11AP58511 FOSL1P1-201ENST00000511041 816 ntBASIC15.17■□□□□ 0.02
SMIM11AP58511 AC107918.2-201ENST00000530817 355 ntBASIC15.17■□□□□ 0.02
SMIM11AP58511 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.17■□□□□ 0.02
SMIM11AP58511 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.17■□□□□ 0.02
SMIM11AP58511 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.17■□□□□ 0.02
SMIM11AP58511 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
SMIM11AP58511 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
SMIM11AP58511 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.17■□□□□ 0.02
SMIM11AP58511 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM11AP58511 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM11AP58511 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM11AP58511 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.17■□□□□ 0.02
SMIM11AP58511 AC126177.1-201ENST00000547829 2218 ntBASIC15.17■□□□□ 0.02
SMIM11AP58511 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM11AP58511 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.17■□□□□ 0.02
SMIM11AP58511 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM11AP58511 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SMIM11AP58511 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SMIM11AP58511 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.17■□□□□ 0.02
SMIM11AP58511 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.17■□□□□ 0.02
SMIM11AP58511 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.17■□□□□ 0.02
SMIM11AP58511 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM11AP58511 AL592424.1-201ENST00000563624 1536 ntBASIC15.17■□□□□ 0.02
SMIM11AP58511 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
SMIM11AP58511 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM11AP58511 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SMIM11AP58511 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.17■□□□□ 0.02
SMIM11AP58511 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM11AP58511 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
SMIM11AP58511 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms