Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
FOXG1P55316 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.36□□□□□ -0.11
FOXG1P55316 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.36□□□□□ -0.11
FOXG1P55316 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
FOXG1P55316 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
FOXG1P55316 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
FOXG1P55316 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
FOXG1P55316 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.36□□□□□ -0.11
FOXG1P55316 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
FOXG1P55316 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.36□□□□□ -0.11
FOXG1P55316 PCDHB19P-201ENST00000570871 2371 ntBASIC14.36□□□□□ -0.11
FOXG1P55316 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.36□□□□□ -0.11
FOXG1P55316 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 AL645939.2-201ENST00000427340 991 ntBASIC14.36□□□□□ -0.11
FOXG1P55316 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.36□□□□□ -0.11
FOXG1P55316 RNA5SP410-201ENST00000516285 106 ntBASIC14.36□□□□□ -0.11
FOXG1P55316 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 RFPL4AP1-201ENST00000530883 850 ntBASIC14.36□□□□□ -0.11
FOXG1P55316 AC069262.1-201ENST00000539058 672 ntBASIC14.36□□□□□ -0.11
FOXG1P55316 AL512356.2-201ENST00000546955 174 ntBASIC14.36□□□□□ -0.11
FOXG1P55316 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.36□□□□□ -0.11
FOXG1P55316 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.36□□□□□ -0.11
FOXG1P55316 MIR4453-201ENST00000584019 89 ntBASIC14.36□□□□□ -0.11
FOXG1P55316 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.36□□□□□ -0.11
FOXG1P55316 MIR6080-201ENST00000617359 66 ntBASIC14.36□□□□□ -0.11
FOXG1P55316 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.36□□□□□ -0.11
FOXG1P55316 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.36□□□□□ -0.11
FOXG1P55316 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
FOXG1P55316 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.36□□□□□ -0.11
FOXG1P55316 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
FOXG1P55316 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.36□□□□□ -0.11
FOXG1P55316 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
FOXG1P55316 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FOXG1P55316 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FOXG1P55316 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FOXG1P55316 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FOXG1P55316 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.35□□□□□ -0.11
FOXG1P55316 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FOXG1P55316 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
FOXG1P55316 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FOXG1P55316 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.35□□□□□ -0.11
FOXG1P55316 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FOXG1P55316 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
FOXG1P55316 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
FOXG1P55316 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FOXG1P55316 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FOXG1P55316 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.35□□□□□ -0.11
FOXG1P55316 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
FOXG1P55316 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FOXG1P55316 FAM220BP-201ENST00000377689 816 ntBASIC14.35□□□□□ -0.11
FOXG1P55316 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
FOXG1P55316 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FOXG1P55316 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.35□□□□□ -0.11
FOXG1P55316 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.35□□□□□ -0.11
FOXG1P55316 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.35□□□□□ -0.11
FOXG1P55316 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.35□□□□□ -0.11
FOXG1P55316 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.35□□□□□ -0.11
FOXG1P55316 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.35□□□□□ -0.11
FOXG1P55316 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FOXG1P55316 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
FOXG1P55316 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.35□□□□□ -0.11
FOXG1P55316 AC025678.2-201ENST00000562061 970 ntBASIC14.35□□□□□ -0.11
FOXG1P55316 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FOXG1P55316 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FOXG1P55316 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
FOXG1P55316 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
FOXG1P55316 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.35□□□□□ -0.11
FOXG1P55316 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
FOXG1P55316 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.35□□□□□ -0.11
FOXG1P55316 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FOXG1P55316 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FOXG1P55316 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.35□□□□□ -0.11
FOXG1P55316 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
FOXG1P55316 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms