Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH12P55289 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CDH12P55289 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH12P55289 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH12P55289 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.36■□□□□ 0.05
CDH12P55289 LAGE3P1-201ENST00000425356 484 ntBASIC15.36■□□□□ 0.05
CDH12P55289 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.36■□□□□ 0.05
CDH12P55289 AC104640.1-201ENST00000562617 2109 ntBASIC15.36■□□□□ 0.05
CDH12P55289 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH12P55289 MIR4492-201ENST00000581627 80 ntBASIC15.36■□□□□ 0.05
CDH12P55289 IFNL4P1-201ENST00000607083 540 ntBASIC15.36■□□□□ 0.05
CDH12P55289 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
CDH12P55289 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CDH12P55289 REXO1L3P-201ENST00000622202 1288 ntBASIC15.36■□□□□ 0.05
CDH12P55289 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.36■□□□□ 0.05
CDH12P55289 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CDH12P55289 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH12P55289 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH12P55289 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.36■□□□□ 0.05
CDH12P55289 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CDH12P55289 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.36■□□□□ 0.05
CDH12P55289 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH12P55289 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.36■□□□□ 0.05
CDH12P55289 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH12P55289 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH12P55289 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CDH12P55289 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH12P55289 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH12P55289 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH12P55289 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH12P55289 PCGF3-213ENST00000620529 1899 ntBASIC15.35■□□□□ 0.05
CDH12P55289 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH12P55289 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH12P55289 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH12P55289 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH12P55289 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH12P55289 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH12P55289 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
CDH12P55289 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH12P55289 PRAL-201ENST00000624952 3286 ntBASIC15.35■□□□□ 0.05
CDH12P55289 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH12P55289 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH12P55289 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.35■□□□□ 0.05
CDH12P55289 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CDH12P55289 AC006557.2-201ENST00000592985 1240 ntBASIC15.35■□□□□ 0.05
CDH12P55289 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.35■□□□□ 0.05
CDH12P55289 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
CDH12P55289 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH12P55289 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH12P55289 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH12P55289 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH12P55289 AL805961.1-202ENST00000641562 540 ntBASIC15.35■□□□□ 0.05
CDH12P55289 AC107918.4-202ENST00000641623 219 ntBASIC15.35■□□□□ 0.05
CDH12P55289 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH12P55289 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH12P55289 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH12P55289 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH12P55289 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH12P55289 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH12P55289 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH12P55289 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CDH12P55289 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.35■□□□□ 0.05
CDH12P55289 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH12P55289 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH12P55289 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CDH12P55289 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CDH12P55289 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH12P55289 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CDH12P55289 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH12P55289 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDH12P55289 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CDH12P55289 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH12P55289 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH12P55289 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH12P55289 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CDH12P55289 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH12P55289 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH12P55289 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH12P55289 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH12P55289 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH12P55289 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
CDH12P55289 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH12P55289 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH12P55289 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
CDH12P55289 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH12P55289 SLC25A6P2-201ENST00000497974 877 ntBASIC15.34■□□□□ 0.05
CDH12P55289 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH12P55289 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.34■□□□□ 0.05
CDH12P55289 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH12P55289 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CDH12P55289 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH12P55289 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDH12P55289 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDH12P55289 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH12P55289 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CDH12P55289 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
CDH12P55289 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH12P55289 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CDH12P55289 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH12P55289 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms