Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNFSF9P41273 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNFSF9P41273 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TNFSF9P41273 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.7■□□□□ 0.42
TNFSF9P41273 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TNFSF9P41273 KLF2P3-201ENST00000451977 1087 ntBASIC17.7■□□□□ 0.42
TNFSF9P41273 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.7■□□□□ 0.42
TNFSF9P41273 AC125807.1-201ENST00000483097 614 ntBASIC17.7■□□□□ 0.42
TNFSF9P41273 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TNFSF9P41273 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TNFSF9P41273 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.7■□□□□ 0.42
TNFSF9P41273 AL355385.1-201ENST00000606123 409 ntBASIC17.7■□□□□ 0.42
TNFSF9P41273 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNFSF9P41273 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TNFSF9P41273 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.7■□□□□ 0.42
TNFSF9P41273 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TNFSF9P41273 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNFSF9P41273 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TNFSF9P41273 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.7■□□□□ 0.42
TNFSF9P41273 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TNFSF9P41273 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TNFSF9P41273 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.7■□□□□ 0.42
TNFSF9P41273 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TNFSF9P41273 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.7■□□□□ 0.42
TNFSF9P41273 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.69■□□□□ 0.42
TNFSF9P41273 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.69■□□□□ 0.42
TNFSF9P41273 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF9P41273 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF9P41273 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
TNFSF9P41273 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF9P41273 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF9P41273 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.69■□□□□ 0.42
TNFSF9P41273 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
TNFSF9P41273 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF9P41273 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
TNFSF9P41273 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF9P41273 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.69■□□□□ 0.42
TNFSF9P41273 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF9P41273 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF9P41273 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF9P41273 AL390955.2-201ENST00000603032 514 ntBASIC17.69■□□□□ 0.42
TNFSF9P41273 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.69■□□□□ 0.42
TNFSF9P41273 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.69■□□□□ 0.42
TNFSF9P41273 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF9P41273 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.69■□□□□ 0.42
TNFSF9P41273 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
TNFSF9P41273 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.69■□□□□ 0.42
TNFSF9P41273 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.69■□□□□ 0.42
TNFSF9P41273 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TNFSF9P41273 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF9P41273 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
TNFSF9P41273 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF9P41273 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF9P41273 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF9P41273 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TNFSF9P41273 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
TNFSF9P41273 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TNFSF9P41273 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.68■□□□□ 0.42
TNFSF9P41273 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF9P41273 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF9P41273 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFSF9P41273 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF9P41273 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TNFSF9P41273 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF9P41273 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF9P41273 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF9P41273 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF9P41273 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFSF9P41273 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF9P41273 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF9P41273 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TNFSF9P41273 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFSF9P41273 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFSF9P41273 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.68■□□□□ 0.42
TNFSF9P41273 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF9P41273 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.68■□□□□ 0.42
TNFSF9P41273 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.68■□□□□ 0.42
TNFSF9P41273 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.68■□□□□ 0.42
TNFSF9P41273 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.68■□□□□ 0.42
TNFSF9P41273 AC007967.4-201ENST00000614700 386 ntBASIC17.68■□□□□ 0.42
TNFSF9P41273 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.68■□□□□ 0.42
TNFSF9P41273 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFSF9P41273 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TNFSF9P41273 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF9P41273 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF9P41273 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF9P41273 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TNFSF9P41273 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
TNFSF9P41273 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF9P41273 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF9P41273 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFSF9P41273 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TNFSF9P41273 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.68■□□□□ 0.42
TNFSF9P41273 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF9P41273 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF9P41273 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFSF9P41273 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF9P41273 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.67■□□□□ 0.42
TNFSF9P41273 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF9P41273 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 393.1 ms